From 402063d4e24dc0de109a0dca944da7382c1de74d Mon Sep 17 00:00:00 2001 From: Usman Rashid Date: Mon, 19 Aug 2024 14:05:41 +1200 Subject: [PATCH] More renaming --- README.md | 2 +- docs/parameters.md | 2 +- nextflow.config | 6 +++--- nextflow_schema.json | 2 +- 4 files changed, 6 insertions(+), 6 deletions(-) diff --git a/README.md b/README.md index b29bac5..712a5d1 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ [![Lint/stub on Linux/Docker](https://github.com/PlantandFoodResearch/genepal/actions/workflows/test.yml/badge.svg)](https://github.com/PlantandFoodResearch/genepal/actions/workflows/test.yml) -A NextFlow pipeline for pan-genome annotation. It can also be used for annotation of a single genome. +A NextFlow pipeline for single genome and pan-genome annotation. ## Flowchart diff --git a/docs/parameters.md b/docs/parameters.md index e25939e..a4638c5 100644 --- a/docs/parameters.md +++ b/docs/parameters.md @@ -1,6 +1,6 @@ # plantandfoodresearch/genepal pipeline parameters -A NextFlow pipeline for pan-genome annotation +A NextFlow pipeline for single genome and pan-genome annotation ## Input/output options diff --git a/nextflow.config b/nextflow.config index df016c3..57d8d4e 100644 --- a/nextflow.config +++ b/nextflow.config @@ -94,10 +94,10 @@ trace { } manifest { - name = 'pangene' + name = 'genepal' author = """Usman Rashid, Jason Shiller""" - homePage = 'https://github.com/PlantandFoodResearch/pangene' - description = """A NextFlow pipeline for pan-genome annotation""" + homePage = 'https://github.com/PlantandFoodResearch/genepal' + description = """A NextFlow pipeline for single genome and pan-genome annotation""" mainScript = 'main.nf' nextflowVersion = '!>=23.04.4' version = '0.4.0+dev' diff --git a/nextflow_schema.json b/nextflow_schema.json index 3d44e01..13706a9 100644 --- a/nextflow_schema.json +++ b/nextflow_schema.json @@ -2,7 +2,7 @@ "$schema": "http://json-schema.org/draft-07/schema", "$id": "https://raw.githubusercontent.com/plantandfoodresearch/genepal/master/nextflow_schema.json", "title": "plantandfoodresearch/genepal pipeline parameters", - "description": "A NextFlow pipeline for pan-genome annotation", + "description": "A NextFlow pipeline for single genome and pan-genome annotation", "type": "object", "definitions": { "input_output_options": {