[PA165971634] Bad GPML for Pentose Phosphate Pathway (Erythrocyte)

[pharmgen]

Latest GPML for pathwayPA165971634 is obsolete.
Use this instead: PA165971634-new.gpml

Note that even the updated GPML has errors that must be fixed:

• [MAPPINFO]: PD pathway doesn't have 'pharmacodynamic' in name.
• 'Fructose-6-phosphate' [id:a1cf6]: Missing PharmGKB Accession ID.
• 'Ribulose-5-phosphate' [id:a4c12]: Missing PharmGKB Accession ID.
• 'NADPH' [id:a5bbb]: Missing PharmGKB Accession ID.
• 'ADP' [id:a5ecd]: Missing PharmGKB Accession ID.
• 'Ribose-5-phosphate' [id:b4525]: Missing PharmGKB Accession ID.
• 'glycolysis' [id:bb915]: Missing PharmGKB Accession ID.
• 'glycolysis' [id:bb915]: BlackBox should be converted to Phenotype or Process.
• 'PRPP' [id:c22c2]: Missing PharmGKB Accession ID.
• 'Glucose-6-phosphate' [id:cb7c8]: Missing PharmGKB Accession ID.
• 'NADP' [id:e18f2]: Missing PharmGKB Accession ID.
• '6-phosphogluconate' [id:efd84]: Missing PharmGKB Accession ID.
• '6-phosphogluconolactone' [id:f2018]: Missing PharmGKB Accession ID.
• 'Glucose' [id:fb73e]: Missing PharmGKB Accession ID.
• 'NADP' [id:b4f2e]: Missing PharmGKB Accession ID.
• 'NADPH' [id:bce08]: Missing PharmGKB Accession ID.
• 'Glucose' [id:ce61e]: Missing PharmGKB Accession ID.
• 'adenine' [id:d4e5f]: Missing PharmGKB Accession ID.
• Info Line line [id:b56d6] (from 'NADPH' [id:bce08] to 'Oxidative Stress Regulatory Pathway (Erythrocyte)' [id:a84a6]): Info labels lines are no longer allowed.
• Info Line line [id:bd3c4] (from 'NADPH' [id:bce08] to 'Methylene Blue Pathway, Pharmacodynamics' [id:d9a38]): Info labels lines are no longer allowed.
• Biochemical Reaction line [id:cb614] (from 'adenine' [id:d4e5f] to anchor on Biochemical Reaction line [id:bd6b1] (from 'PRPP' [id:c22c2] to 'ADP' [id:a5ecd])): Only a control interaction can be anchored to another interaction.
• Transport line [id:bf4c3] (from 'Glucose' [id:ce61e] to 'SLC2A1' [id:add34]): Transport does not have same entity on both ends.
• Biochemical Reaction line [id:cb614] (from 'adenine' [id:d4e5f] to anchor on Biochemical Reaction line [id:bd6b1] (from 'PRPP' [id:c22c2] to 'ADP' [id:a5ecd])): Conversion interactions must connect two objects.
• Transport line [id:d094a] (from 'SLC2A1' [id:add34] to 'Glucose' [id:fb73e]): Transport does not have same entity on both ends.
• Biochemical Reaction line [id:ddd91] (from '6-phosphogluconolactone' [id:f2018] to '6-phosphogluconate' [id:efd84]): Missing evidence.
• Biochemical Reaction line [id:e8ecd] (from 'Ribulose-5-phosphate' [id:a4c12] to 'Ribose-5-phosphate' [id:b4525]): Missing evidence.
• Info Line line [id:f2a9a] (from 'NADPH' [id:a5bbb] to 'Oxidative Stress Regulatory Pathway (Erythrocyte)' [id:a84a6]): Info labels lines are no longer allowed.
• Info Line line [id:f1783] (from 'NADPH' [id:a5bbb] to 'Methylene Blue Pathway, Pharmacodynamics' [id:d9a38]): Info labels lines are no longer allowed.
• 'Methylene Blue Pathway, Pharmacodynamics' [id:d9a38]: Not linked to anything.
• 'Oxidative Stress Regulatory Pathway (Erythrocyte)' [id:a84a6]: Not linked to anything.