From 2af8b21f9b4852582f09768ffcc3637784161d19 Mon Sep 17 00:00:00 2001
From: IgorRodchenkov <rodche@gmail.com>
Date: Sun, 10 Mar 2024 17:36:50 -0400
Subject: [PATCH] Fixed a bug (was setting organism multiple times...)

---
 .../java/org/ctdbase/converter/CTDInteractionConverter.java | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/src/main/java/org/ctdbase/converter/CTDInteractionConverter.java b/src/main/java/org/ctdbase/converter/CTDInteractionConverter.java
index 4b0ebca..3f3fee8 100644
--- a/src/main/java/org/ctdbase/converter/CTDInteractionConverter.java
+++ b/src/main/java/org/ctdbase/converter/CTDInteractionConverter.java
@@ -587,8 +587,10 @@ private SimplePhysicalEntity createSPEFromActor(ActorType actor, String state, L
                 spe = createEntityFromActor(actor, eClass, refClass, state);
                 //add organism if it makes sense
                 if(spe.getEntityReference() instanceof SequenceEntityReference) {
-                    BioSource organism = bioSource(taxonTypes);
-                    ((SequenceEntityReference) spe.getEntityReference()).setOrganism(organism);
+                    SequenceEntityReference ser = (SequenceEntityReference) spe.getEntityReference();
+                    if(ser.getOrganism() == null) {
+                        ser.setOrganism(bioSource(taxonTypes));
+                    }
                 }
                 break;
             case IXN: