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inParvfect/HelixWorks (press backspace or delete to remove)Computing the long codeword FER. First need to speed test, figure out benchmarking, clean code and get it done.
Parvfect
- 1
- Opened on Apr 16, 2024
- #52
If the nmotifs, npicks, ff change should update automatically, having to chage manually currently
Parvfect
- Opened on Apr 8, 2024
- #51
Definite difference in performance for zero codeword vs the normal case, not quite sure why Image
Parvfect
- 10
- Opened on Apr 3, 2024
- #50
First optimization without tree to bring down to as low as we can
Parvfect
- 2
- Opened on Feb 14, 2024
- #49
Need to run a large code for the cluster - max time let s say 4 hours or something. Need robust testing and
parallaization
Parvfect
- 5
- Opened on Jan 29, 2024
- #48
https://outlook.office.com/mail/inbox/id/AAQkADdlNWE1MWMxLWVkM2MtNGI3NS1iOWFiLWM0MTY5MDU4NjA0OAAQAFpY2GbeIARGuQRTeiV9%2Bnc%3D
https://helixworks.notion.site/Sequencing-Data-Decoding-Consensus-EIC01-01-1280-70805a608fdb42ad94c0a348b0aeb6c2 ...
Parvfect
- Opened on Jan 3, 2024
- #47
Currently is slower than Matrix QSPA although it performs slightly better (hahaha)
Image
But yeah, optimize to get it as quick as you can. It s gonna be decently slow since there is a n^3 term in there ...
Parvfect
- 1
- Opened on Dec 28, 2023
- #46
Once we have the weighted graph it s gonna be simple enough to implement the algorithm. Don t need to care about the
shifting stuff currently, but yeah - translating the algorithm into this form. There ...
Parvfect
- Opened on Dec 26, 2023
- #45
Parvfect
- 1
- Opened on Dec 26, 2023
- #44
Parvfect
- 1
- Opened on Nov 29, 2023
- #43
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