Isoseq reproducibility

[Ismail-Curie]

Hello,

I ran IsoSeq cluster2 (IsoSeq 4.1.2, commit v4.1.2) multiple times using the same input and parameters, but noticed slight variations in the results. I’m wondering if there is a way to ensure reproducibility in the IsoSeq pipeline. Specifically, is it possible to set a fixed random seed or control other factors that might introduce variability during these steps?

Thank you