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snp_idx not defined in genotype_reader #20

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jeffhsu3 opened this issue Feb 25, 2016 · 0 comments
Open

snp_idx not defined in genotype_reader #20

jeffhsu3 opened this issue Feb 25, 2016 · 0 comments

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@jeffhsu3
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Not sure if this is the function I should be using as it is placed in the deprecated folder.

I get the following when trying to call genotype_reader_h5py.getPos:
NameError: global name 'snp_idx' is not defined

Just commented out this line and it worked

elif snp_idx is not None:    
    return self.position.iloc[snp_idx]

Guessing this was useful at getting out 1 particular SNP by index.
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