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Add Data Scaling #185

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lawrence-mbf opened this issue Feb 4, 2020 · 2 comments
Open

Add Data Scaling #185

lawrence-mbf opened this issue Feb 4, 2020 · 2 comments
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status: future depends on another issue being solved first

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@lawrence-mbf
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lawrence-mbf commented Feb 4, 2020

datasets:
- name: data
  dims:
  - name: times
    required: true
    length: null
    doc: optional doc string
  - name: electrodes
    required: false
    length: null
    doc: optional doc string
  - name: dim3
    required: false
    length: null
    doc: optional doc string
  coords:
  - name: time
    dims_index: 0
    coord:
    - dataset_name: timestamps
      dims_index: 0
      type: aligned
  - name: electrodes
    dims_index: 1
    coord:
    - dataset_name: electrodes
      dims_index: 0
      type: aligned
  - name: z
    dims_index:
    - 0
    - 1
    coord:
    - dataset_name: arbitrary_2d_mask
      dims_index:
      - 0
      - 1
      type: aligned

Note:
All classes that have Datasets with Data Scaling will also embed two attributes:

  • coordinates
  • dimensions
    which are a JSON-encoded array and object respectively.

NeurodataWithoutBorders/pynwb#626

@lawrence-mbf lawrence-mbf self-assigned this Feb 4, 2020
@ehennestad ehennestad added the status: need more info unclear what the issue is or what needs to be done label Oct 31, 2024
@ehennestad
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@lawrence-mbf Just to clarify, this is not something which is relevant now, but might be if the linked issue is resolved?

@lawrence-mbf
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@ehennestad Yeah, this is a feature request tied to that pynwb feature request. Once that issue gets closed then I would assume that the feature is ready for porting over to MatNWB.

@ehennestad ehennestad added status: future depends on another issue being solved first and removed status: need more info unclear what the issue is or what needs to be done labels Oct 31, 2024
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