diff --git a/docs/images/Raman_spectroscopy_Pattern.png b/docs/images/Raman_spectroscopy_Pattern.png new file mode 100644 index 0000000..9cd676c Binary files /dev/null and b/docs/images/Raman_spectroscopy_Pattern.png differ diff --git a/docs/images/VIBSO_T-Box_graph_views.drawio b/docs/images/VIBSO_T-Box_graph_views.drawio index 00c5213..bb84f00 100644 --- a/docs/images/VIBSO_T-Box_graph_views.drawio +++ b/docs/images/VIBSO_T-Box_graph_views.drawio @@ -1,36 +1,11 @@ - + - + - - - - - - - - - - - - - - - - - - - - - - - - - - + @@ -64,46 +39,46 @@ - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + @@ -114,8 +89,8 @@ - - + + @@ -125,8 +100,8 @@ - - + + @@ -136,26 +111,26 @@ - - + + - + - - + + - + - - + + @@ -172,111 +147,111 @@ - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - + - - + + - + - + - + - + - + - + - - + + - - + + @@ -286,12 +261,12 @@ - + - - + + @@ -301,8 +276,8 @@ - - + + @@ -314,30 +289,36 @@ - + + + + + + + - + - + - + - + - + - + - - + + @@ -346,18 +327,18 @@ - + - - + + - - + + @@ -367,15 +348,15 @@ - + - + - - + + @@ -385,12 +366,12 @@ - + - - + + @@ -400,8 +381,8 @@ - - + + @@ -411,32 +392,32 @@ - + - - + + - + - + - + - + - - + + @@ -445,46 +426,46 @@ - + - + - + - - + + - + - - + + - - + + - - + + - - + + @@ -493,27 +474,27 @@ - + - + - + - + - - + + - - - + + + @@ -526,23 +507,23 @@ - + - + - - + + - - + + @@ -550,10 +531,32 @@ + + + + + + + + + + + + + + + + + + + + + + - - + + @@ -563,8 +566,8 @@ - - + + @@ -573,48 +576,48 @@ - + - + - + - - + + - + - + - + - + - - + + - - + + - + - - + + @@ -623,12 +626,12 @@ - + - - + + @@ -638,8 +641,8 @@ - - + + @@ -650,62 +653,62 @@ - - + + - - + + - + - + - + - + - - + + - - + + - - + + - - + + - + - + - - + + @@ -715,12 +718,12 @@ - + - - + + @@ -731,8 +734,8 @@ - - + + @@ -743,8 +746,8 @@ - - + + @@ -753,13 +756,25 @@ + + + + + + + + + + + + - + - - + + @@ -769,79 +784,82 @@ - + - + - + - + - - + + - - + + - - + + - - + + - - + + + + + - + - + - + - - + + - - + + - - + + - - + + @@ -852,12 +870,12 @@ - - + + - + @@ -865,10 +883,21 @@ + + + + + + + + + + + - - + + @@ -879,8 +908,8 @@ - - + + @@ -890,97 +919,85 @@ - + - - - - - - - + - + - + - + - + - + - + - + - + - + + + + - + - + - + - + - + - + - + - + - + - + - - - - - - - - - - + - + @@ -1002,62 +1019,62 @@ - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + @@ -1067,8 +1084,8 @@ - - + + @@ -1078,8 +1095,8 @@ - - + + @@ -1089,12 +1106,12 @@ - + - - + + @@ -1104,8 +1121,8 @@ - - + + @@ -1115,145 +1132,219 @@ - + - - + + - + - - + + - + - + - - + + - + + + + + + + - - + + - - - + + + - - + + + + + - - - - - + + + - - + + + + + - + - - + + - - - - + + + + + + + - + - - + + - - - + + + - - + + - - + + + + + - - + + + + + + + + + + + + + + + + + + - - - - + + + - - - - + + + + - - + + + + - - - - + + + + + - - + + + + - - + + + + + + + + + + + - - + + + + - - - - + + + + + - - - - + + + - - - - + + + + + - - - - + + + - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/src/ontology/components/vibso_classes.owl b/src/ontology/components/vibso_classes.owl index 3f93ba2..daaae0c 100644 --- a/src/ontology/components/vibso_classes.owl +++ b/src/ontology/components/vibso_classes.owl @@ -27,11 +27,16 @@ Ontology( Annotation(rdfs:comment "This component is derived from the manually edited 'src/templates/vibso_classes.tsv' template.") +Declaration(Class(obo:BFO_0000015)) Declaration(Class(obo:BFO_0000029)) +Declaration(Class(obo:BFO_0000040)) +Declaration(Class(obo:CHMO_0000656)) +Declaration(Class(obo:CHMO_0000823)) Declaration(Class(obo:IAO_0000027)) Declaration(Class(obo:IAO_0000032)) Declaration(Class(obo:IAO_0000109)) Declaration(Class(obo:IAO_0000140)) +Declaration(Class(obo:OBI_0000067)) Declaration(Class(obo:OBI_0000654)) Declaration(Class(obo:OBI_0000968)) Declaration(Class(obo:OBI_0001933)) @@ -70,6 +75,12 @@ Declaration(Class(obo:VIBSO_0000027)) Declaration(Class(obo:VIBSO_0000028)) Declaration(Class(obo:VIBSO_0000029)) Declaration(Class(obo:VIBSO_0000030)) +Declaration(Class(obo:VIBSO_0000050)) +Declaration(Class(obo:VIBSO_0000051)) +Declaration(Class(obo:VIBSO_0000052)) +Declaration(Class(obo:VIBSO_0000053)) +Declaration(Class(obo:VIBSO_0000054)) +Declaration(ObjectProperty(obo:BFO_0000050)) Declaration(Class(obo:VIBSO_0000031)) Declaration(Class(obo:VIBSO_0000032)) Declaration(Class(obo:VIBSO_0000033)) @@ -88,7 +99,11 @@ Declaration(Class(obo:VIBSO_0000045)) Declaration(Class(obo:VIBSO_0003017)) Declaration(ObjectProperty(obo:IAO_0000136)) Declaration(ObjectProperty(obo:OBI_0000293)) +Declaration(ObjectProperty(obo:OBI_0000299)) Declaration(ObjectProperty(obo:OBI_0000312)) +Declaration(ObjectProperty(obo:RO_0000087)) +Declaration(ObjectProperty(obo:RO_0002500)) +Declaration(ObjectProperty(obo:RO_0002608)) Declaration(ObjectProperty(obo:OBI_0001938)) Declaration(AnnotationProperty(obo:IAO_0000112)) Declaration(AnnotationProperty(obo:IAO_0000115)) @@ -452,6 +467,54 @@ AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000030 ) Annotation(dc:source ) obo:IAO_0000115 obo:VIBSO_0000050 "A process of inelastic scattering of electromagnetic radiation by a material entity (the scatterer), characterized by a loss or gain in energy of the incident photons corresponding to a vibrational, rotational or electronic energy transition within the scatterer."@en) +AnnotationAssertion(obo:IAO_0000118 obo:VIBSO_0000050 "Raman effect"@en) +AnnotationAssertion(rdfs:label obo:VIBSO_0000050 "Raman scattering"@en) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000050 ) +SubClassOf(obo:VIBSO_0000050 obo:BFO_0000015) + +# Class: obo:VIBSO_0000051 (Stokes Raman scattering) + +AnnotationAssertion(obo:IAO_0000112 obo:VIBSO_0000051 "ORCID:0000-0002-1595-3213"@en) +AnnotationAssertion(Annotation(dc:source ) obo:IAO_0000115 obo:VIBSO_0000051 "A Raman scattering in which the scattered photon has lower energy than the incident photon."@en) +AnnotationAssertion(rdfs:label obo:VIBSO_0000051 "Stokes Raman scattering"@en) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000051 ) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000051 ) +SubClassOf(obo:VIBSO_0000051 obo:VIBSO_0000050) + +# Class: obo:VIBSO_0000052 (anti-Stokes Raman scattering) + +AnnotationAssertion(obo:IAO_0000112 obo:VIBSO_0000052 "ORCID:0000-0002-1595-3213"@en) +AnnotationAssertion(Annotation(dc:source ) obo:IAO_0000115 obo:VIBSO_0000052 "A Raman scattering in which the emitted photon has higher energy than the incident photon."@en) +AnnotationAssertion(rdfs:label obo:VIBSO_0000052 "anti-Stokes Raman scattering"@en) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000052 ) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000052 ) +SubClassOf(obo:VIBSO_0000052 obo:VIBSO_0000050) + +# Class: obo:VIBSO_0000053 (Stokes Raman Spectroscopy) + +AnnotationAssertion(obo:IAO_0000112 obo:VIBSO_0000053 "ORCID:0000-0002-1595-3213"@en) +AnnotationAssertion(obo:IAO_0000115 obo:VIBSO_0000053 "A Raman spectroscopy that has the objective to focus only on the detection of Stokes Raman scattering."@en) +AnnotationAssertion(rdfs:label obo:VIBSO_0000053 "Stokes Raman Spectroscopy"@en) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000053 ) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000053 ) +SubClassOf(obo:VIBSO_0000053 obo:CHMO_0000656) +SubClassOf(obo:VIBSO_0000053 ObjectSomeValuesFrom(obo:OBI_0000293 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067) ObjectSomeValuesFrom(obo:RO_0002500 obo:VIBSO_0000051)))) +SubClassOf(obo:VIBSO_0000053 ObjectSomeValuesFrom(obo:OBI_0000299 ObjectIntersectionOf(obo:IAO_0000109 ObjectSomeValuesFrom(obo:IAO_0000136 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067) ObjectSomeValuesFrom(obo:RO_0002500 obo:VIBSO_0000051))) ObjectSomeValuesFrom(obo:IAO_0000136 ObjectIntersectionOf(obo:VIBSO_0000051 ObjectSomeValuesFrom(obo:RO_0002608 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067)))))))) + +# Class: obo:VIBSO_0000054 (anti-Stokes Raman Spectroscopy) + +AnnotationAssertion(obo:IAO_0000112 obo:VIBSO_0000054 "ORCID:0000-0002-1595-3213"@en) +AnnotationAssertion(obo:IAO_0000115 obo:VIBSO_0000054 "A Raman spectroscopy that has the objective to focus only on the detection of anti-Stokes Raman scattering."@en) +AnnotationAssertion(rdfs:label obo:VIBSO_0000054 "anti-Stokes Raman Spectroscopy"@en) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000054 ) +AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000054 ) +SubClassOf(obo:VIBSO_0000054 obo:CHMO_0000656) +SubClassOf(obo:VIBSO_0000054 ObjectSomeValuesFrom(obo:OBI_0000293 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067) ObjectSomeValuesFrom(obo:RO_0002500 obo:VIBSO_0000052)))) +SubClassOf(obo:VIBSO_0000054 ObjectSomeValuesFrom(obo:OBI_0000299 ObjectIntersectionOf(obo:IAO_0000109 ObjectSomeValuesFrom(obo:IAO_0000136 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067) ObjectSomeValuesFrom(obo:RO_0002500 obo:VIBSO_0000052))) ObjectSomeValuesFrom(obo:IAO_0000136 ObjectIntersectionOf(obo:VIBSO_0000052 ObjectSomeValuesFrom(obo:RO_0002608 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067)))))))) # Class: obo:VIBSO_0000031 (resolution) AnnotationAssertion(obo:IAO_0000115 obo:VIBSO_0000031 "A physical quality of a measurement device that expresses (realizes) the device's capacity to distinguish between two distinct but closely related measurements of the same physical quality or type, often quantified as the smallest detectable difference (resolution interval) between measured values."@en) @@ -625,4 +688,4 @@ SubClassOf(obo:VIBSO_0003017 obo:IAO_0000140) SubClassOf(obo:VIBSO_0003017 ObjectSomeValuesFrom(obo:OBI_0000312 obo:OBI_0200181)) -) \ No newline at end of file +) diff --git a/src/ontology/components/vibso_classes.owl.owl b/src/ontology/components/vibso_classes.owl.owl new file mode 100644 index 0000000..e69de29 diff --git a/src/ontology/vibso-edit.owl b/src/ontology/vibso-edit.owl index 101091d..1d8eb49 100644 --- a/src/ontology/vibso-edit.owl +++ b/src/ontology/vibso-edit.owl @@ -108,6 +108,12 @@ EquivalentClasses(Annotation(rdfs:comment "Equivalence asserted manually in VIBS EquivalentClasses(Annotation(rdfs:comment "Equivalence asserted manually in VIBSO based on the textual definition of this class.") Annotation(rdfs:isDefinedBy obo:vibso.owl) obo:CHMO_0000581 ObjectIntersectionOf(obo:CHMO_0000102 obo:CHMO_0000228)) +# Class: obo:CHMO_0000656 (Raman spectroscopy) + +SubClassOf(Annotation(rdfs:comment "This axiom is asserted manually in VIBSO based on the textual definition of +this class.") Annotation(rdfs:isDefinedBy obo:vibso.owl) Annotation(rdfs:seeAlso ) obo:CHMO_0000656 ObjectSomeValuesFrom(obo:OBI_0000293 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067) ObjectSomeValuesFrom(obo:RO_0002500 obo:VIBSO_0000030)))) +SubClassOf(Annotation(rdfs:comment "Equivalence asserted manually in VIBSO based on the textual definition of this class.") Annotation(rdfs:isDefinedBy obo:vibso.owl) Annotation(rdfs:seeAlso ) obo:CHMO_0000656 ObjectSomeValuesFrom(obo:OBI_0000299 ObjectIntersectionOf(obo:IAO_0000027 ObjectIntersectionOf(ObjectSomeValuesFrom(obo:IAO_0000136 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067) ObjectSomeValuesFrom(obo:RO_0002500 obo:VIBSO_0000030))) ObjectSomeValuesFrom(obo:IAO_0000136 ObjectIntersectionOf(obo:VIBSO_0000030 ObjectSomeValuesFrom(obo:RO_0002608 ObjectIntersectionOf(obo:BFO_0000040 ObjectSomeValuesFrom(obo:RO_0000087 obo:OBI_0000067))))))))) + # Class: obo:NCBITaxon_9606 (Homo sapiens) AnnotationAssertion(rdfs:label obo:NCBITaxon_9606 "person") @@ -124,6 +130,10 @@ SubClassOf(obo:UO_0000002 obo:IAO_0000003) SubClassOf(obo:UO_0000051 obo:IAO_0000003) +# Class: obo:VIBSO_0000051 (Stokes Raman scattering) + +DisjointClasses(obo:VIBSO_0000051 obo:VIBSO_0000052) + ############################ # Named Individuals diff --git a/src/templates/vibso_classes.tsv b/src/templates/vibso_classes.tsv index d06a0f6..5535556 100644 --- a/src/templates/vibso_classes.tsv +++ b/src/templates/vibso_classes.tsv @@ -15,8 +15,8 @@ obo:VIBSO_0000011 diffraction grating device A device that is an optical compon obo:VIBSO_0000012 deprecated_excitation wavelength A physical quality of the light source that is used used to excite a system to a higher energy state. This class is not needed, as PATO:wavelength is sufficient, if this quality of a Raman device is really needed. true failed exploratory term wavelength ORCID:0000-0002-1595-3213 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/48 owl:Class obo:VIBSO_0000013 excitation wavelength setting setting datum A setting datum that specifies the wavelength of an electromagnetic radiation source (e.g. a laser) which has the function to excite the energy state of a target material. This class should better be defined in a more general device ontology or a domain ontology with the scope of optical devices. ORCID:0000-0002-1595-3213 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/48 owl:Class obo:VIBSO_0000014 objective magnification factor setting magnification|magnification setting setting datum A setting datum that specifies the magnification factor of the objective collecting the scattered light. 100x ORCID:0000-0002-1595-3213|ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/24 owl:Class -obo:VIBSO_0000015 spectral window range maximum acquisition band maximum setting datum A setting datum that specifies the upper boundary of the spectral window range utilized during the acquisition of spectroscopic data. 210 cm^-1 It needs to be determined, if this is also part of another kind of spectrum, such as a vibrational spectrum in general. We also need to decide, if we need to also model the terms window size and window center, from which this term is derived. ORCID:0000-0002-1595-3213|ORCID:0000-0001-7694-5519 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/31 owl:Class -obo:VIBSO_0000016 spectral window range minimum acquisition band minimum setting datum A setting datum that specifies the lower boundary of the spectral window range utilized during the acquisition of spectroscopic data. 1960 cm^-1 It needs to be determined, if this is also part of another kind of spectrum, such as a vibrational spectrum in general. We also need to decide, if we need to also model the terms window size and window center, from which this term is derived. ORCID:0000-0002-1595-3213|ORCID:0000-0001-7694-5519 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/31 owl:Class +obo:VIBSO_0000015 spectral window range maximum acquisition band maximum data item|('part of' some 'Raman spectrum') A data item that is the part of a Raman spectrum which represents the maximum wavenumber included in the spectrum and which is calculated from the windows size and window center. 210 cm^-1 It needs to be determined, if this is also part of another kind of spectrum, such as a vibrational spectrum in general. We also need to decide, if we need to also model the terms window size and window center, from which this term is derived. ORCID:0000-0002-1595-3213|ORCID:0000-0001-7694-5519 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/31 owl:Class +obo:VIBSO_0000016 spectral window range minimum acquisition band minimum data item|('part of' some 'Raman spectrum') A data item that is the part of a Raman spectrum which represents the minimum wavenumber included in the spectrum and which is calculated from the windows size and window center. 1960 cm^-1 It needs to be determined, if this is also part of another kind of spectrum, such as a vibrational spectrum in general. We also need to decide, if we need to also model the terms window size and window center, from which this term is derived. ORCID:0000-0002-1595-3213|ORCID:0000-0001-7694-5519 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/31 owl:Class obo:VIBSO_0000017 incident light power datum excitation light power|light power on the sample scalar measurement datum A scalar measurement datum that is the result of measuring the incoming light power before the sample holder and which depends on the laser power and on the dispersive behaviour of the filters and optical components. The incident power is an elementary measurement parameter allowing to compare among measurements conducted with the same setup. A thorough investigation of the effects of light irradiation onto the sample depends on the local irradiance (power per unit area) and requires deeper knowledge of the irradiation geometry, e.g. width, depth and shape of the focal spot. 200 mW ORCID:0000-0001-7694-5519 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/29 owl:Class obo:VIBSO_0000018 region of interest imaging region of interest|ROI site A site that refers to a user-defined portion of the image area in which data will be acquired. The remainder of the image area will be discarded. https://wiki.charisma.ideaconsult.net/wiki/Item:Q57 See also https://w3id.org/reproduceme#ROI & http://purl.obolibrary.org/obo/NCIT_C85402 ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class obo:VIBSO_0000019 region of interest width ROI width|ROI horizontal length setting datum A setting datum that specifies the width (length in the X direction) of the region of interest. region of interest width = (point distance X) * (number of measurements X) 1 mm ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class @@ -46,4 +46,9 @@ obo:VIBSO_0000042 spectral resolution interval as energy spectral resolution in obo:VIBSO_0000043 radiometric resolution interval resolution interval A resolution interval that quantifies the minimum difference in irradiated energy, often coded as gray level in a grayscale or look-up-table (LUT). ISBN 081946043-5 This class is actually to general for VIBSO's scope. It needs to be discussed with CHMO and OBI devs which of these is a better home, as there currently does not exist an optical device ontology within OBO Foundry. OBI contains most terms around optical devices so far. ORCID:0000-0003-2673-366X|ORCID:0000-0003-2673-366X|ORCID:0000-0002-2239-3955 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/125 owl:Class obo:VIBSO_0000044 temporal resolution interval resolution interval A resolution interval that quantifies the temporal separation between two measurements or frames, often expressed as the inverse of the frame rate. In techniques where temporal resolution is not directly derived from frame rate, it quantifies the minimum temporal interval between two resolvable events. ISBN 081946043-5 In techniques where the temporal resolution is not given directly from a temporal distance between subsequent measurements (e.g., pulsed time resolved pump-probe techniques), it can be used more properly as defined above This class is actually to general for VIBSO's scope. It needs to be discussed with CHMO and OBI devs which of these is a better home, as there currently does not exist an optical device ontology within OBO Foundry. OBI contains most terms around optical devices so far. ORCID:0000-0003-2673-366X|ORCID:0000-0003-2673-366X|ORCID:0000-0002-2239-3955 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/125 owl:Class obo:VIBSO_0000045 diffraction limit spatial resolution interval A spatial resolution interval that quantifies the theoretical maximum spatial resolution achievable by an optical system, constrained by the diffraction of light. ISO/DIS 18115-3, https://www.iso.org/obp/ui#d25805417e256 The Abbe diffraction limit, is defined as λ/ (2 NA) in which λ is the wavelength of the illuminating light and NA is the numerical aperture. This class is actually to general for VIBSO's scope. It needs to be discussed with CHMO and OBI devs which of these is a better home, as there currently does not exist an optical device ontology within OBO Foundry. OBI contains most terms around optical devices so far. ORCID:0000-0003-2673-366X|ORCID:0000-0003-2673-366X|ORCID:0000-0002-2239-3955 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/125 owl:Class +obo:VIBSO_0000050 Raman scattering Raman effect process A process of inelastic scattering of electromagnetic radiation by a material entity (the scatterer), characterized by a loss or gain in energy of the incident photons corresponding to a vibrational, rotational or electronic energy transition within the scatterer. https://www.iso.org/obp/ui#iso:std:iso:18115:-3:dis:ed-1:v1:en:sec:2.5.16|https://www.iso.org/obp/ui#iso:std:iso:18115:-3:dis:ed-1:v1:en:sec:2.5.8 ORCID:0000-0002-1595-3213 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/103 owl:Class +obo:VIBSO_0000051 Stokes Raman scattering Raman scattering A Raman scattering in which the scattered photon has lower energy than the incident photon. https://www.iso.org/obp/ui#iso:std:iso:18115:-3:dis:ed-1:v1:en:sec:2.5.25 ORCID:0000-0002-1595-3213 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/103|https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/pull/129 owl:Class +obo:VIBSO_0000052 anti-Stokes Raman scattering Raman scattering A Raman scattering in which the emitted photon has higher energy than the incident photon. https://www.iso.org/obp/ui#iso:std:iso:18115:-3:dis:ed-1:v1:en:sec:2.5.1 ORCID:0000-0002-1595-3213 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/103|https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/pull/129 owl:Class +obo:VIBSO_0000053 Stokes Raman Spectroscopy Raman spectroscopy|(has_specified_output some ('measurement datum' and ('is about' some ('material entity' and ('has role' some 'evaluant role') and ('causal agent in process' some 'Stokes Raman scattering'))) and ('is about' some ('Stokes Raman scattering' and ('process has causal agent' some ('material entity' and ('has role' some 'evaluant role')))))))|(has_specified_input some ('material entity' and ('has role' some 'evaluant role') and ('causal agent in process' some 'Stokes Raman scattering'))) A Raman spectroscopy that has the objective to focus only on the detection of Stokes Raman scattering. ORCID:0000-0002-1595-3213 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/103|https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/pull/129 owl:Class +obo:VIBSO_0000054 anti-Stokes Raman Spectroscopy Raman spectroscopy|(has_specified_output some ('measurement datum' and ('is about' some ('material entity' and ('has role' some 'evaluant role') and ('causal agent in process' some 'anti-Stokes Raman scattering'))) and ('is about' some ('anti-Stokes Raman scattering' and ('process has causal agent' some ('material entity' and ('has role' some 'evaluant role')))))))|(has_specified_input some ('material entity' and ('has role' some 'evaluant role') and ('causal agent in process' some 'anti-Stokes Raman scattering'))) A Raman spectroscopy that has the objective to focus only on the detection of anti-Stokes Raman scattering. ORCID:0000-0002-1595-3213 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/103|https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/pull/129 owl:Class obo:VIBSO_0003017 spectral window center setting datum|'is_specified_output_of' some 'center calculation data transformation' A setting datum that specifies the middle wavelength/wavenumber of a spectrum, equal to the average of the maximum and minimum of the spectral window range utilized during the acquisition of spectroscopic data. It corresponds to the optimal alignment or centering of the spectrometer to ensure that the most relevant spectral features are captured effectively within the defined acquisition range. 560 cm^-1 ORCID:0000-0002-1595-3213|ORCID:0000-0002-2239-3955 https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/88 owl:Class