Datasets

Genetic marker data

Cattle breed microsatellites

• name: microbov
• source: package adegenet
• size: 704 genotypes, 30 microsatellites, 373 alleles

Here is some reproducible code to access the data:

library(adegenet)
data(microbov)
microbov

Cat colonies in Nancy (France)

• name: nancycats
• source: package adegenet
• size: 237 genotypes, 9 microsatellites, 108 alleles

Here is some reproducible code to access the data:

library(adegenet)
data(nancycats)
nancycats

Extended HGDP-CEPH panel (Human microsatellites)

• name: eHGDP
• source: package adegenet
• size: 1350 genotypes, 378 microsatellites, 8170 alleles

Here is some reproducible code to access the data:

library(adegenet)
data(eHGDP)
eHGDP

####Landscape genomic data for loblolly pine (Pinus taeda L.)

• source:website of Andrew Eckert: http://eckertdata.blogspot.fr/
• size: 550 trees in 94 counties; 1730 SNPs
• Other data: Spatial coordinates and environmental data in each county