The SummarySequenceData vignette fails to build

[hlapp]

This is due to changes in CRAN packages and needs fixing. The vignette therefore had to be removed from the master branch, and is now reinstated on the summaryseqstats branch. Development to fix the issues can resume on that branch.

[zkamvar]

Bump.

Some things that are causing this to fail:

1. The data have changed so there are now 40 samples present as opposed to 20.
2. HWE.test.genind is no longer valid, having been replaced by hw.test from pegas, which does not support haploid data. It might be beneficial to remove this.

[mmlopezu]

I'll work on it ASAP

On Tue, Feb 2, 2016 at 12:40 AM, Zhian N. Kamvar [email protected]
wrote:

Bump.

Some things that are causing this to fail:

1. The data have changed so there are now 40 samples present as
   opposed to 20.
2. HWE.test.genind is no longer valid, having been replaced by hw.test
   from pegas, which does not support haploid data. It might be beneficial to
   remove this.

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Margarita M. López-Uribe
NSF Postdoctoral Fellow
Department of Entomology
and
Department of Applied Ecology
North Carolina State University
https://sites.google.com/a/cornell.edu/mm-lopez-uribe/
https://sites.google.com/a/cornell.edu/margarita-m-lopez-uribe/