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setup.py
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#!/usr/bin/env python3
import re
import setuptools
long_description = open('README.md').read()
version = re.search(r'__version__\s*=\s*[\'"]([^\'"]*)[\'"]',
open('protaxovis/__init__.py').read()).group(1)
setuptools.setup(
name='ProTaxoVis',
version=version,
author='Mathias Bockwoldt',
author_email='[email protected]',
description='Map Blast results on a common-knowledge taxonomix (phylogenetic) tree',
long_description=long_description,
long_description_content_type='text/markdown',
url='https://github.com/MolecularBioinformatics/ProTaxoVis',
packages=setuptools.find_packages(),
package_data = {'protaxovis': ['templates/*']},
entry_points={'console_scripts': [
'taxovis = protaxovis.cli:main',
'taxotree = protaxovis.taxotree:main',
'blast2fasta = protaxovis.blast2fasta:main'
]},
install_requires=[
'PyQt5 >= 5.11.3, < 6',
'wheel >= 0.33.0, < 1',
'numpy >= 1.15.1, < 2',
'scipy >= 1.11.0, < 2',
'matplotlib >= 3.1.1, < 4',
'pandas == 1.*',
'Pillow == 10.*',
'biopython >= 1.74, <= 1.84',
'ete3 == 3.1.*',
'taxfinder >= 0.0.1'
],
classifiers=[
'Programming Language :: Python :: 3 :: Only',
'Programming Language :: Python :: 3.6',
'Programming Language :: Python :: 3.7',
'Programming Language :: Python :: 3.8',
'Programming Language :: Python :: 3.9',
'Programming Language :: Python :: 3.10',
'License :: OSI Approved :: MIT License',
'Operating System :: OS Independent',
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'Natural Language :: English',
'Topic :: Scientific/Engineering :: Bio-Informatics',
],
python_requires='>=3.6',
)