diff --git a/_modules/ms_mint/targets.html b/_modules/ms_mint/targets.html index 8c37e74..ca5e8d6 100644 --- a/_modules/ms_mint/targets.html +++ b/_modules/ms_mint/targets.html @@ -127,7 +127,7 @@

Source code for ms_mint.targets

 
     - updates the target lists to newest format
     - ensures peak labels are strings
-    - replaces np.NaN with None
+    - replaces np.nan with None
 
     :param targets: DataFrame in target-list format.
     :type targets: pandas.DataFrame
@@ -176,7 +176,7 @@ 
Source code for ms_mint.targets
 
     targets.index = range(len(targets))
     targets = targets[targets.mz_mean.notna()]
-    targets = targets.replace(np.NaN, None)
+    targets = targets.replace(np.nan, None)
     fill_missing_rt_values(targets)
     convert_to_seconds(targets)
 
diff --git a/genindex.html b/genindex.html
index 8279ac7..63791b6 100644
--- a/genindex.html
+++ b/genindex.html
@@ -602,7 +602,7 @@ 
U

 
V

 

   
 

diff --git a/ms_mint.html b/ms_mint.html
index 764ebcf..a134101 100644
--- a/ms_mint.html
+++ b/ms_mint.html
@@ -498,19 +498,10 @@ 
Submodules
+

 

-property version

-
ms-mint version number.

-

-
Returns:

-
Version string.

-

-
Return type:

-
str

-

-

-

+version = '0.0.0'
+

 
 
 
@@ -1606,7 +1597,7 @@ 
ms_mint.plotting module
 
  • updates the target lists to newest format
    • 
 
  • ensures peak labels are strings
    • 
-
  • replaces np.NaN with None
    • 
+
  • replaces np.nan with None
    • 
 
 
    
 
    Parameters:
    
@@ -1821,7 +1812,6 @@ 
    ms_mint.plotting module
 
    
 
    Module contents
    
-
    A Python library for targetd metabolomics.
    
 
    
 
 
diff --git a/objects.inv b/objects.inv
index 970033b..b444f0e 100644
Binary files a/objects.inv and b/objects.inv differ
diff --git a/searchindex.js b/searchindex.js
index aa524c4..3d2155a 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"alltitles": {"A Python library for targeted metabolomics": [[3, "a-python-library-for-targeted-metabolomics"]], "Code standards": [[3, "code-standards"]], "Contents:": [[0, null]], "Contributions": [[3, "contributions"]], "Data extraction": [[3, "data-extraction"]], "Documentation": [[3, "documentation"]], "FAQ": [[3, "faq"]], "Hierarchical clustering": [[3, "hierarchical-clustering"]], "Indices and tables": [[0, "indices-and-tables"]], "Installation": [[3, "installation"]], "Load files": [[3, "load-files"]], "Load target list": [[3, "load-target-list"]], "Module contents": [[2, "module-ms_mint"]], "Optimize retention times": [[3, "optimize-retention-times"]], "Parameters from target list": [[3, "parameters-from-target-list"]], "Plot peak shapes": [[3, "plot-peak-shapes"]], "Plotting and data exploration": [[3, "plotting-and-data-exploration"]], "Principal Components Analysis": [[3, "principal-components-analysis"]], "Processing a large number of files": [[3, "processing-a-large-number-of-files"]], "Publications that used ms-mint": [[3, "publications-that-used-ms-mint"]], "Results columns": [[3, "results-columns"]], "Run data extraction": [[3, "run-data-extraction"]], "Submodules": [[2, "submodules"]], "Usage": [[3, "usage"]], "Wecome to ms-mint": [[3, "wecome-to-ms-mint"]], "Welcome to ms-mint\u2019s documentation!": [[0, "welcome-to-ms-mint-s-documentation"]], "What input files can be used": [[3, "what-input-files-can-be-used"]], "What is a target list": [[3, "what-is-a-target-list"]], "Which properties does ms-mint extract": [[3, "which-properties-does-ms-mint-extract"]], "ms-mint application with graphical user iterface (GUI)": [[3, "ms-mint-application-with-graphical-user-iterface-gui"]], "ms-mint in JupyterLab, or the Jupyter Notebook": [[3, "ms-mint-in-jupyterlab-or-the-jupyter-notebook"]], "ms_mint": [[1, "ms-mint"]], "ms_mint package": [[2, "ms-mint-package"]], "ms_mint.Mint module": [[2, "module-ms_mint.Mint"]], 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