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Issues list

ingest microbe-drug interactions sources biomedical data sources
#35 opened Dec 16, 2021 by realmarcin
1
ingest microbe taxon to taxon edges from mondo
#6 opened Dec 17, 2020 by cmungall
Annotate biolink-model with subset tags for microbe subset
#7 opened Dec 17, 2020 by cmungall
ingest gene knockout data from LBL microbial fitness experiments environmental
#9 opened Dec 23, 2020 by realmarcin
1
trait, qualities, characteristics
#10 opened Dec 30, 2020 by wdduncan
Ingest Disbiome microbiome data biomedical
#12 opened Jan 6, 2021 by realmarcin
1
Define schemas for sources and include semantic enums in the schema mapping
#14 opened Feb 23, 2021 by cmungall
1
NER for chemicals and pathways
#15 opened Feb 24, 2021 by hrshdhgd
1
traits not showing up in docs
#20 opened Mar 1, 2021 by cmungall
Ingest Weissman et al human microbiome taxa microbial trait data biomedical data sources
#27 opened Jun 11, 2021 by realmarcin
1
The automated enums should be replaced with curated values
#28 opened Jun 11, 2021 by cmungall
@realmarcin
Ingest gutMEGA biomedical data sources
#33 opened Aug 3, 2021 by realmarcin
Map cell_shape in big trait table mapping
#4 opened Dec 17, 2020 by cmungall
@realmarcin @hrshdhgd
6
Ingest global microbial gene biogeography data sources environmental
#34 opened Dec 15, 2021 by realmarcin
ingest Web of Microbes environment-metabolite change-microbe associations data sources environmental
#36 opened Jan 6, 2022 by realmarcin
Ingest distribution of pathobionts across 12 skin sites biomedical data sources
#37 opened Jan 27, 2022 by realmarcin
Ingest The Microbe Directory data sources
#38 opened Feb 2, 2022 by realmarcin
Inspect data and sources for PREGO
#39 opened Feb 2, 2022 by realmarcin
ingest METABOLIC genomic source data and trait predictions data sources
#41 opened Feb 17, 2022 by realmarcin
Ingest FusionDB data sources
#42 opened Oct 17, 2022 by realmarcin
Ingest ProGenomes3 data sources
#44 opened Nov 23, 2022 by realmarcin
ingest dbBact data data sources
#58 opened Jan 25, 2023 by realmarcin
ingest protraits data sources
#61 opened Mar 1, 2023 by realmarcin
ingest UniProt reference proteomes + SwissProt data sources
#64 opened Apr 3, 2023 by realmarcin
sort transforms in consistent order
#289 opened Feb 22, 2025 by realmarcin
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