FS12b

to fecth raw data SRA info

esearch -db sra -query PRJNA638426| efetch -format runinfo > FS12b_SRA_meta.csv

command used to create silva reference alignment

mothur "#pcr.seqs(fasta=silva.nr_v132.align, start=11894, end=25319, keepdots=F, processors=8); unique.seqs()"

need to copy over data from motur out

1029 cp './raw_data/NEW_MOTHUR_OUT/FS12b.shared' ./data/ 1030 cp './raw_data/NEW_MOTHUR_OUT/FS12b_OTU.taxonomy' ./data/