'Shadows built-in name input' inspection on lambda parameters

[sharkovadarya]

input can be used as a lambda parameter name for params section (see snakemake docs for params), it's probably best not to highlight a valid parameter name.

[iromeo]

Same error for output

params:
        batches = ",".join(SAMPLES_DF["batch_prefix"]),
        basename=lambda wildcards, output: os.path.splitext(output[0])

[iromeo]

Also

def collect_wildcards_for_condition(params):
...

[iromeo]

Also:

[iromeo]

See PyShadowingNamesInspection, PyShadowingBuiltinsInspection