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DESCRIPTION
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Package: SIMplyBee
Type: Package
Title: 'AlphaSimR' Extension for Simulating Honeybee Populations and Breeding Programmes
Version: 0.4.1
Authors@R: c(
person("Jana", "Obšteter", email = "[email protected]",
role = c("aut", "cre"), comment = c(ORCID = "0000-0003-1511-3916")),
person("Laura", "Strachan", role = "aut",
comment = c(ORCID = "0000-0002-2569-0250")),
person("Jernej", "Bubnič", role = "aut",
comment = c(ORCID = "0000-0003-1362-3736")),
person("Gregor", "Gorjanc", role = c("aut"),
comment = c(ORCID = "0000-0001-8008-2787")))
Description: An extension of the 'AlphaSimR' package
(<https://cran.r-project.org/package=AlphaSimR>) for stochastic simulations of
honeybee populations and breeding programmes. 'SIMplyBee' enables simulation of
individual bees that form a colony, which includes a queen, fathers (drones
the queen mated with), virgin queens, workers, and drones. Multiple colony can
be merged into a population of colonies, such as an apiary or a whole country
of colonies. Functions enable operations on castes, colony, or colonies, to
ease 'R' scripting of whole populations. All 'AlphaSimR' functionality with
respect to genomes and genetic and phenotype values is available and further
extended for honeybees, including haplo-diploidy, complementary sex determiner
locus, colony events (swarming, supersedure, etc.), and colony phenotype values.
URL: https://github.com/HighlanderLab/SIMplyBee
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports: methods, R6, stats, utils, extraDistr (>= 1.9.1), RANN, Rcpp (>= 0.12.7)
Depends: R (>= 3.3.0), AlphaSimR (>= 1.5.3)
LinkingTo: Rcpp, RcppArmadillo (>= 0.7.500.0.0), BH
RoxygenNote: 7.3.2
Suggests:
rmarkdown,
knitr,
ggplot2,
testthat (>= 3.0.0),
Matrix
Config/testthat/edition: 3
Config/Needs/website: tidyverse/tidytemplate
VignetteBuilder: knitr