diff --git a/dist/alchemy.css b/dist/alchemy.css
new file mode 100644
index 0000000..0106e2c
--- /dev/null
+++ b/dist/alchemy.css
@@ -0,0 +1,796 @@
+@-webkit-keyframes fadeIn {
+ 0% {
+ opacity: 0;
+ }
+
+ 25% {
+ opacity: .3;
+ }
+
+ 50% {
+ opacity: .66;
+ }
+
+ 75% {
+ opacity: 1;
+ }
+}
+
+@keyframes fadeIn {
+ 0% {
+ opacity: 0;
+ }
+
+ 25% {
+ opacity: .3;
+ }
+
+ 50% {
+ opacity: .66;
+ }
+
+ 75% {
+ opacity: 1;
+ }
+}
+
+@-webkit-keyframes pulse {
+ 0% {
+ text-shadow: 0 0 10px rgba(255,255,255,0.2),0 0 12px rgba(255,255,255,0.2),0 0 16px rgba(255,255,255,0.2);
+ }
+
+ 25% {
+ text-shadow: 0 0 12px rgba(255,255,255,0.2),0 0 15px rgba(255,255,255,0.2),0 0 20px rgba(255,255,255,0.2),0 0 6px rgba(104,185,254,0.7),0 0 10px rgba(104,185,254,0.7);
+ }
+
+ 50% {
+ text-shadow: 0 0 12px rgba(255,255,255,0.2),0 0 15px rgba(255,255,255,0.2),0 0 20px rgba(255,255,255,0.2),0 0 8px rgba(104,185,254,0.7),0 0 10px rgba(104,185,254,0.7),0 0 15px rgba(104,185,254,0.7);
+ }
+
+ 75% {
+ text-shadow: 0 0 12px rgba(255,255,255,0.2),0 0 15px rgba(255,255,255,0.2),0 0 25px rgba(255,255,255,0.2),0 0 8px rgba(104,185,254,0.7),0 0 12px rgba(104,185,254,0.7),0 0 15px rgba(104,185,254,0.7),0 0 20px rgba(104,185,254,0.7);
+ }
+}
+
+@keyframes pulse {
+ 0% {
+ text-shadow: 0 0 10px rgba(255,255,255,0.2),0 0 12px rgba(255,255,255,0.2),0 0 16px rgba(255,255,255,0.2);
+ }
+
+ 25% {
+ text-shadow: 0 0 12px rgba(255,255,255,0.2),0 0 15px rgba(255,255,255,0.2),0 0 20px rgba(255,255,255,0.2),0 0 6px rgba(104,185,254,0.7),0 0 10px rgba(104,185,254,0.7);
+ }
+
+ 50% {
+ text-shadow: 0 0 12px rgba(255,255,255,0.2),0 0 15px rgba(255,255,255,0.2),0 0 20px rgba(255,255,255,0.2),0 0 8px rgba(104,185,254,0.7),0 0 10px rgba(104,185,254,0.7),0 0 15px rgba(104,185,254,0.7);
+ }
+
+ 75% {
+ text-shadow: 0 0 12px rgba(255,255,255,0.2),0 0 15px rgba(255,255,255,0.2),0 0 25px rgba(255,255,255,0.2),0 0 8px rgba(104,185,254,0.7),0 0 12px rgba(104,185,254,0.7),0 0 15px rgba(104,185,254,0.7),0 0 20px rgba(104,185,254,0.7);
+ }
+}
+
+@-webkit-keyframes slide-in {
+ 0% {
+ -webkit-transform: translate(-100%, 0);
+ transform: translate(-100%, 0);
+ }
+
+ 100% {
+ -webkit-transform: translate(0%, 0);
+ transform: translate(0%, 0);
+ }
+}
+
+@keyframes slide-in {
+ 0% {
+ -webkit-transform: translate(-100%, 0);
+ transform: translate(-100%, 0);
+ }
+
+ 100% {
+ -webkit-transform: translate(0%, 0);
+ transform: translate(0%, 0);
+ }
+}
+
+@-webkit-keyframes slide-out {
+ 0% {
+ -webkit-transform: translate(0%, 0);
+ transform: translate(0%, 0);
+ }
+
+ 100% {
+ -webkit-transform: translate(-100%, 0);
+ transform: translate(-100%, 0);
+ }
+}
+
+@keyframes slide-out {
+ 100% {
+ -webkit-transform: translate(-100%, 0);
+ transform: translate(-100%, 0);
+ }
+}
+
+svg {
+ background: black;
+ position: absolute;
+ left: 0;
+ cursor: -webkit-grab;
+ height: 100%;
+ width: 100%;
+ color: #333;
+}
+
+.node {
+ cursor: pointer;
+}
+
+.node circle {
+ fill: #68b9fe;
+ fill-opacity: 0.8;
+ stroke: #127dc1;
+ stroke-opacity: 1;
+}
+
+.node circle.root {
+ fill: #9000ff;
+ stroke: #90c73d;
+}
+
+.node text.root {
+ font-size: 32px;
+}
+
+.node text {
+ display: none;
+ fill: white;
+ font-weight: 200;
+ text-anchor: middle;
+ z-index: 1000;
+ text-shadow: 1px 1px #333, -1px 1px #333, 1px -1px #333, -1px -1px #333;
+}
+
+.node.active {
+ opacity: 1;
+ fill: white;
+}
+
+.node.active.highlight {
+ opacity: .8 !important;
+}
+
+.node.active.highlight circle {
+ fill-opacity: 1;
+ stroke: #015399;
+ stroke-width: 3px;
+ fill: white;
+}
+
+.node.active.selected circle {
+ stroke-width: 5px;
+ fill-opacity: .8;
+ stroke-opacity: 1;
+ stroke: white;
+ fill: #68b9fe;
+}
+
+.node.active.selected text {
+ display: block;
+}
+
+.node.active.selected:hover circle {
+ stroke-width: 5px;
+ fill-opacity: .8;
+ stroke-opacity: 1;
+ stroke: white;
+ fill: white;
+}
+
+.node.active:hover circle {
+ stroke-width: 3px;
+ fill-opacity: .8;
+ stroke-opacity: 1;
+ stroke: #015399;
+ fill: #9bd0fe;
+}
+
+.node.active:hover text {
+ display: block;
+}
+
+.node.inactive {
+ opacity: 0;
+}
+
+.node.inactive.highlight {
+ opacity: .8 !important;
+}
+
+.node.inactive.highlight circle {
+ fill-opacity: 1;
+ stroke: #e89619;
+ stroke-width: 2px;
+ fill: white;
+}
+
+defs #arrow path {
+ stroke: #CCC;
+ stroke-opacity: 0.2;
+ fill: #CCC;
+ opacity: 1;
+}
+
+.edge {
+ stroke-width: 2;
+ stroke: #ccc;
+ stroke-opacity: 0.2;
+}
+
+.edge text {
+ stroke-width: 0;
+}
+
+.edge .edge-handler {
+ fill: none;
+ stroke: none;
+}
+
+.edge .edge-line {
+ fill: none;
+}
+
+.edge.active {
+ opacity: 1;
+}
+
+.edge.active text {
+ display: none;
+ fill: white;
+ font-weight: 200;
+ text-anchor: middle;
+ z-index: 1000;
+}
+
+.edge.active:hover,
+.edge.active.selected {
+ cursor: pointer;
+}
+
+.edge.active:hover .edge-line,
+.edge.active.selected .edge-line {
+ stroke: white !important;
+ stroke-opacity: 1;
+ stroke-width: 4;
+}
+
+.edge.active:hover text,
+.edge.active.selected text {
+ display: block;
+}
+
+.edge.active.highlight {
+ opacity: .8 !important;
+ stroke-width: 2;
+ stroke: white !important;
+ stroke-opacity: 1;
+}
+
+.edge.active.highlight text {
+ display: block;
+}
+
+.edge.inactive {
+ display: none;
+ opacity: 0;
+}
+
+.edge.inactive.highlight {
+ opacity: .8 !important;
+ stroke-width: 2;
+ stroke-opacity: .5;
+ stroke: #e89619;
+}
+
+#loading-spinner {
+ position: absolute;
+ right: 0;
+}
+
+#zoom-controls {
+ background-color: transparent;
+ background-image: url("images/maze-black.png");
+ border-top-right-radius: 3px;
+ border-bottom-right-radius: 3px;
+ box-shadow: 0 0 5px rgba(255,255,255,0.3);
+ margin-top: 10%;
+ z-index: 5;
+ position: relative;
+ display: block;
+ width: 55px;
+}
+
+#zoom-controls #zoom-in,
+#zoom-controls #zoom-out,
+#zoom-controls #zoom-reset {
+ padding: 12px;
+ margin: 0;
+ width: 100%;
+}
+
+#zoom-controls #zoom-in i,
+#zoom-controls #zoom-out i,
+#zoom-controls #zoom-reset i {
+ color: #E89619;
+}
+
+#zoom-controls #zoom-in:hover,
+#zoom-controls #zoom-out:hover,
+#zoom-controls #zoom-reset:hover {
+ background-color: rgba(255,255,255,0.2);
+}
+
+#zoom-controls #zoom-in:active,
+#zoom-controls #zoom-out:active,
+#zoom-controls #zoom-reset:active {
+ border: none;
+}
+
+.fa-caret-right,
+.fa-caret-down,
+.fa-search {
+ margin: 0 5px;
+ color: #e89619;
+}
+
+#search {
+ margin-top: 2em;
+ margin-bottom: 1em;
+ padding: .5em 1em;
+ width: 100%;
+}
+
+#search span {
+ vertical-align: bottom;
+}
+
+#search input {
+ background-color: black;
+ border: none;
+ font-size: 20px;
+ color: white;
+ padding-left: 0.5em;
+}
+
+#search .search-icon {
+ height: 22px;
+ background-color: #000;
+ border-color: #000;
+ border-right-color: #111;
+}
+
+#stats {
+ padding: 0.5em 1em;
+ background-color: transparent;
+ border-bottom: thin dashed #e89619;
+}
+
+#stats #stats-header {
+ padding: 10px;
+}
+
+#stats #all-stats {
+ color: white;
+ border-radius: none;
+ border: none;
+ background: transparent;
+ overflow: auto;
+}
+
+#stats #all-stats li {
+ padding: 3px;
+}
+
+#stats #node-stats-graph,
+#stats #edge-stats-graph {
+ height: 250px;
+}
+
+#stats #node-stats-graph svg,
+#stats #edge-stats-graph svg {
+ opacity: .6;
+ background: transparent;
+}
+
+#stats #node-stats-graph text,
+#stats #edge-stats-graph text {
+ font-size: 16px;
+ fill: white;
+ font-weight: 200;
+ text-anchor: middle;
+ z-index: 1000;
+}
+
+#stats #node-stats-graph .no-data,
+#stats #edge-stats-graph .no-data {
+ margin: 30px 0;
+ color: #e89619;
+}
+
+#stats .badge {
+ border-radius: 0;
+ height: 100%;
+ background-color: rgba(104,185,254,0.6);
+}
+
+#editor {
+ padding: 0.5em 1em;
+ background-color: transparent;
+ border-bottom: thin dashed #e89619;
+}
+
+#editor h3 {
+ padding: 10px;
+}
+
+#editor #element-options {
+ display: -webkit-flex;
+ display: flex;
+ -webkit-flex-direction: column;
+ flex-direction: column;
+ cursor: pointer;
+ margin-top: 10px;
+ margin-left: 2%;
+ color: white;
+}
+
+#editor #element-options .property,
+#editor #element-options #add-property-form {
+ display: -webkit-inline-flex;
+ display: inline-flex;
+ margin: 4px 0;
+ width: 100%;
+}
+
+#editor #element-options .property-value,
+#editor #element-options #add-property-form #add-property #add-prop-value {
+ border: thin rgba(255,255,255,0.2) solid;
+ border-left: none;
+ background-color: black;
+ color: white;
+ width: 100%;
+ border-top-left-radius: 0;
+ border-bottom-left-radius: 0;
+}
+
+#editor #element-options .property-name,
+#editor #element-options #add-property-form #add-property #add-prop-key {
+ text-align: center;
+ font-weight: 200;
+ cursor: default;
+ background: #2E2E2E;
+ border: thin transparent solid;
+ color: #e89619;
+ border-right: none;
+ border-top-right-radius: 0;
+ border-bottom-right-radius: 0;
+}
+
+#editor #element-options input[type="submit"],
+#editor #element-options #update-properties {
+ color: #e89619;
+ border-top-right-radius: 4px;
+ border-bottom-right-radius: 4px;
+ width: auto;
+ background: rgba(255,255,255,0.1);
+ border: thin solid #e89619;
+ text-align: center;
+}
+
+#editor #element-options input[type="submit"]:active,
+#editor #element-options #update-properties:active,
+#editor #element-options input[type="submit"]:focus,
+#editor #element-options #update-properties:focus {
+ outline: none;
+}
+
+#editor #element-options input[type="submit"]:hover,
+#editor #element-options #update-properties:hover {
+ color: white;
+ border: thin solid white;
+}
+
+#editor #element-options #update-properties {
+ border-radius: 4px;
+ padding: 10px;
+ width: 100%;
+ margin-bottom: 20px;
+}
+
+#editor #element-options #add-property-form #add-property {
+ display: -webkit-flex;
+ display: flex;
+ -webkit-flex-grow: 2;
+ flex-grow: 2;
+ -webkit-flex-direction: column;
+ flex-direction: column;
+}
+
+#editor #element-options #add-property-form #add-property #add-prop-value {
+ text-align: center;
+ width: 100%;
+ border-top-right-radius: 0;
+ border-bottom-right-radius: 0;
+ border-bottom-left-radius: 4px;
+ border: thin rgba(255,255,255,0.2) solid;
+}
+
+#editor #element-options #add-property-form #add-property #add-prop-key {
+ cursor: text;
+ width: 100%;
+ border-top-left-radius: 4px;
+ border-bottom-left-radius: 0;
+}
+
+#editor #editor-interactions.active {
+ color: #e89619;
+}
+
+#editor #editor-interactions.inactive {
+ color: white;
+}
+
+#editor #node-editor.enabled,
+#editor #edge-editor.enabled {
+ -webkit-animation: fadeIn 1s linear;
+ animation: fadeIn 1s linear;
+}
+
+#control-dash-wrapper {
+ font-family: 'Source Sans Pro', Helvetica, sans-serif;
+ letter-spacing: .05em;
+ height: inherit;
+ z-index: inherit;
+ padding: 0;
+}
+
+#control-dash-wrapper.initial {
+ -webkit-transform: translate(-100%, 0);
+ transform: translate(-100%, 0);
+}
+
+#control-dash-wrapper.initial #dash-toggle {
+ color: #e89619;
+ -webkit-animation: 4s pulse linear;
+ animation: 4s pulse linear;
+}
+
+#control-dash-wrapper.off-canvas {
+ -webkit-transform: translate(-100%, 0);
+ transform: translate(-100%, 0);
+ -webkit-animation: slide-out .75s linear;
+ animation: slide-out .75s linear;
+}
+
+#control-dash-wrapper.off-canvas #dash-toggle {
+ color: #e89619;
+ -webkit-animation: 4s pulse linear;
+ animation: 4s pulse linear;
+}
+
+#control-dash-wrapper.on-canvas {
+ -webkit-animation: slide-in .75s ease-in-out;
+ animation: slide-in .75s ease-in-out;
+}
+
+#control-dash-wrapper.on-canvas * {
+ box-shadow: none !important;
+}
+
+#control-dash-wrapper.on-canvas #dash-toggle {
+ color: rgba(232,150,25,0.6);
+}
+
+#control-dash-wrapper.on-canvas #dash-toggle:hover {
+ color: #e89619;
+ -webkit-animation: 4s pulse linear;
+ animation: 4s pulse linear;
+}
+
+#control-dash-wrapper #control-dash {
+ overflow-x: hidden;
+ overflow-y: scroll;
+ background-color: transparent;
+ background-image: url("images/maze-black.png");
+ padding: 0;
+ height: inherit;
+ z-index: 5;
+}
+
+#control-dash-wrapper #control-dash h3 {
+ display: inline;
+ margin: 0;
+}
+
+#control-dash-wrapper #dash-toggle {
+ z-index: 5;
+ background-color: transparent;
+ background-image: url("images/maze-black.png");
+ border-top-right-radius: 3px;
+ border-bottom-right-radius: 3px;
+ box-shadow: 0 0 5px rgba(255,255,255,0.3);
+ position: absolute;
+ left: 0;
+ top: 50%;
+ font-size: 2.2em;
+ color: rgba(255,255,255,0.2);
+ padding: 10px;
+}
+
+#control-dash-wrapper button {
+ border-radius: 0;
+ border: none;
+ background-color: transparent;
+}
+
+#control-dash-wrapper button:active {
+ border: none;
+}
+
+#control-dash-wrapper h3 {
+ font-weight: 200;
+ margin-top: 10px;
+ color: white;
+ cursor: pointer;
+ vertical-align: top;
+}
+
+#control-dash-wrapper li {
+ cursor: pointer;
+ background: transparent;
+ border: none;
+ border-radius: 0;
+}
+
+#filters {
+ padding: 0.5em 1em;
+ background-color: transparent;
+ border-bottom: thin dashed #e89619;
+ color: white;
+}
+
+#filters form {
+ width: 100%;
+}
+
+#filters #filter-header {
+ padding: 10px;
+}
+
+#filters #filter-relationships,
+#filters #filter-nodes {
+ background-color: transparent;
+ display: inline-block;
+ width: 45%;
+ margin-left: 2%;
+ overflow: auto;
+ text-align: center;
+ vertical-align: top;
+}
+
+#filters #filter-relationships #filter-node-header,
+#filters #filter-relationships #filter-rel-header,
+#filters #filter-nodes #filter-node-header,
+#filters #filter-nodes #filter-rel-header {
+ margin: 10px 0;
+ cursor: pointer;
+ background-color: transparent;
+ border: none;
+ border-radius: 0;
+ width: 100%;
+}
+
+#filters #filter-relationships #filter-node-header h4,
+#filters #filter-relationships #filter-rel-header h4,
+#filters #filter-nodes #filter-node-header h4,
+#filters #filter-nodes #filter-rel-header h4 {
+ font-weight: 200;
+ display: inline;
+ color: white;
+}
+
+#filters #filter-relationships #filter-node-header:active,
+#filters #filter-relationships #filter-rel-header:active,
+#filters #filter-nodes #filter-node-header:active,
+#filters #filter-nodes #filter-rel-header:active {
+ border: none;
+ box-shadow: none;
+}
+
+#filters #filter-relationships #rel-dropdown,
+#filters #filter-relationships #node-dropdown,
+#filters #filter-nodes #rel-dropdown,
+#filters #filter-nodes #node-dropdown {
+ margin: 20px 0;
+ border-radius: none;
+ border: none;
+ background: transparent;
+}
+
+#filters #filter-relationships #rel-dropdown li,
+#filters #filter-relationships #node-dropdown li,
+#filters #filter-nodes #rel-dropdown li,
+#filters #filter-nodes #node-dropdown li {
+ padding: 5px;
+}
+
+#filters #filter-relationships #rel-dropdown li:hover,
+#filters #filter-relationships #node-dropdown li:hover,
+#filters #filter-nodes #rel-dropdown li:hover,
+#filters #filter-nodes #node-dropdown li:hover {
+ background-color: rgba(255,255,255,0.2);
+}
+
+#filters .disabled {
+ color: rgba(255,255,255,0.5);
+}
+
+#filters .disabled:hover {
+ color: #fdc670;
+}
+
+.alchemy {
+ position: relative;
+}
+
+.alchemy #search form {
+ z-index: 2;
+ display: inline;
+ margin-left: 100px;
+}
+
+.alchemy #add-tag {
+ width: 300px;
+ display: inline-block;
+}
+
+.alchemy #tags input {
+ max-width: 220px;
+}
+
+.alchemy #tags-list {
+ padding: 0;
+}
+
+.alchemy #tags-list .icon-remove-sign {
+ cursor: pointer;
+}
+
+.alchemy #tags-list li {
+ display: inline-block;
+ margin-top: 5px;
+}
+
+.alchemy #tags-list span {
+ background-color: #ccc;
+ color: #333;
+ border-radius: 10em;
+ display: inline-block;
+ padding: 1px 6px;
+}
+
+.alchemy #filter-nodes label,
+.alchemy #filter-relationships label {
+ font-weight: normal;
+ margin-right: 1em;
+}
+
+.alchemy .clear {
+ clear: both;
+}
+
+.alchemy text {
+ font-weight: 200;
+ text-anchor: middle;
+}
\ No newline at end of file
diff --git a/dist/alchemy.js b/dist/alchemy.js
new file mode 100644
index 0000000..7df879f
--- /dev/null
+++ b/dist/alchemy.js
@@ -0,0 +1,2518 @@
+(function() {
+ "Alchemy.js is a graph drawing application for the web.\nCopyright (C) 2014 GraphAlchemist, Inc.\n\nThis program is free software: you can redistribute it and/or modify\nit under the terms of the GNU Affero General Public License as published by\nthe Free Software Foundation, either version 3 of the License, or\n(at your option) any later version.\n\nThis program is distributed in the hope that it will be useful,\nbut WITHOUT ANY WARRANTY; without even the implied warranty of\nMERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\nGNU Affero General Public License for more details.\n\nYou should have received a copy of the GNU Affero General Public License\nalong with this program. If not, see .\nlets";
+ var Alchemy, currentRelationshipTypes,
+ __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; },
+ __slice = [].slice;
+
+ Alchemy = (function() {
+ function Alchemy() {
+ this.allEdges = __bind(this.allEdges, this);
+ this.allNodes = __bind(this.allNodes, this);
+ this.getEdges = __bind(this.getEdges, this);
+ this.getNodes = __bind(this.getNodes, this);
+ this.begin = __bind(this.begin, this);
+ this.setState = __bind(this.setState, this);
+ this.getState = __bind(this.getState, this);
+ this.version = "0.2.0";
+ this.layout = {};
+ this.interactions = {};
+ this.utils = {};
+ this.visControls = {};
+ this.styles = {};
+ this.models = {};
+ this.drawing = {};
+ this.editor = {};
+ this.log = {};
+ this.state = {
+ "interactions": "default",
+ "layout": "default",
+ "filters": {
+ "edges": {},
+ "nodes": {}
+ }
+ };
+ }
+
+ Alchemy.prototype.getState = function(key) {
+ if (this.state.key != null) {
+ return this.state.key;
+ }
+ };
+
+ Alchemy.prototype.setState = function(key, value) {
+ return this.state.key = value;
+ };
+
+ Alchemy.prototype.begin = function(userConf) {
+ this.conf = _.assign({}, alchemy.defaults, userConf);
+ if (typeof alchemy.conf.dataSource === 'string') {
+ return d3.json(alchemy.conf.dataSource, alchemy.startGraph);
+ } else if (typeof alchemy.conf.dataSource === 'object') {
+ return alchemy.startGraph(alchemy.conf.dataSource);
+ }
+ };
+
+ Alchemy.prototype.getNodes = function() {
+ var id, ids, p, params, results, _i, _len;
+ id = arguments[0], ids = 2 <= arguments.length ? __slice.call(arguments, 1) : [];
+ if (ids) {
+ ids.push(id);
+ params = _.union(ids);
+ results = [];
+ for (_i = 0, _len = params.length; _i < _len; _i++) {
+ p = params[_i];
+ results.push(alchemy._nodes[p].properties);
+ }
+ return results;
+ } else {
+ return [this._nodes[id].properties];
+ }
+ };
+
+ Alchemy.prototype.getEdges = function(id, target) {
+ var edge, edge_id, results;
+ if (id == null) {
+ id = null;
+ }
+ if (target == null) {
+ target = null;
+ }
+ if ((id != null) && (target != null)) {
+ edge_id = "" + id + "-" + target;
+ edge = this._edges[edge_id];
+ return [edge.properties];
+ } else if ((id != null) && (target == null)) {
+ results = _.map(this._edges, function(edge) {
+ if ((edge.properties.source === id) || (edge.properties.target === id)) {
+ return edge.properties;
+ }
+ });
+ return _.compact(results);
+ }
+ };
+
+ Alchemy.prototype.allNodes = function() {
+ return _.map(this._nodes, function(n) {
+ return n.properties;
+ });
+ };
+
+ Alchemy.prototype.allEdges = function() {
+ return _.map(this._edges, function(e) {
+ return e.properties;
+ });
+ };
+
+ return Alchemy;
+
+ })();
+
+ currentRelationshipTypes = {};
+
+ if (typeof module !== 'undefined' && module.exports) {
+ module.exports = new Alchemy();
+ } else {
+ this.alchemy = new Alchemy();
+ }
+
+}).call(this);
+
+(function() {
+ alchemy.clustering = (function() {
+ function clustering() {
+ var nodes, _charge, _friction, _gravity, _linkDistancefn, _linkStrength;
+ nodes = alchemy._nodes;
+ this.clusterKey = alchemy.conf.clusterKey;
+ this.identifyClusters();
+ _charge = -500;
+ _linkStrength = function(edge) {
+ if (nodes[edge.source.id].properties[this.clusterKey] === nodes[edge.target.id].properties[this.clusterKey]) {
+ return 1;
+ } else {
+ return 1;
+ }
+ };
+ _friction = function() {
+ return 0.7;
+ };
+ _linkDistancefn = function(edge) {
+ nodes = alchemy._nodes;
+ if (nodes[edge.source.id].properties.root || nodes[edge.target.id].properties.root) {
+ return 300;
+ } else if (nodes[edge.source.id].properties[this.clusterKey] === nodes[edge.target.id].properties[this.clusterKey]) {
+ return 10;
+ } else {
+ return 600;
+ }
+ };
+ _gravity = function(k) {
+ return 8 * k;
+ };
+ this.layout = {
+ charge: _charge,
+ linkStrength: function(edge) {
+ return _linkStrength(edge);
+ },
+ friction: function() {
+ return _friction();
+ },
+ linkDistancefn: function(edge) {
+ return _linkDistancefn(edge);
+ },
+ gravity: function(k) {
+ return _gravity(k);
+ }
+ };
+ }
+
+ clustering.prototype.identifyClusters = function() {
+ var clusters, nodes, _i, _ref, _results;
+ nodes = alchemy._nodes;
+ clusters = _.uniq(_.map(_.values(nodes), function(node) {
+ return node.properties["" + alchemy.conf.clusterKey];
+ }));
+ return this.clusterMap = _.zipObject(clusters, (function() {
+ _results = [];
+ for (var _i = 0, _ref = clusters.length; 0 <= _ref ? _i <= _ref : _i >= _ref; 0 <= _ref ? _i++ : _i--){ _results.push(_i); }
+ return _results;
+ }).apply(this));
+ };
+
+ clustering.prototype.getClusterColour = function(clusterValue) {
+ var index;
+ index = this.clusterMap[clusterValue] % alchemy.conf.clusterColours.length;
+ return alchemy.conf.clusterColours[index];
+ };
+
+ clustering.prototype.edgeGradient = function(edges) {
+ var Q, defs, edge, endColour, gradient, gradient_id, id, ids, nodes, startColour, _i, _len, _ref, _results;
+ defs = d3.select("" + alchemy.conf.divSelector + " svg");
+ Q = {};
+ nodes = alchemy._nodes;
+ _ref = _.map(edges, function(edge) {
+ return edge._d3;
+ });
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ edge = _ref[_i];
+ if (nodes[edge.source.id].properties.root || nodes[edge.target.id].properties.root) {
+ continue;
+ }
+ if (nodes[edge.source.id].properties[this.clusterKey] === nodes[edge.target.id].properties[this.clusterKey]) {
+ continue;
+ }
+ if (nodes[edge.target.id].properties[this.clusterKey] !== nodes[edge.source.id].properties[this.clusterKey]) {
+ id = nodes[edge.source.id].properties[this.clusterKey] + "-" + nodes[edge.target.id].properties[this.clusterKey];
+ if (id in Q) {
+ continue;
+ } else if (!(id in Q)) {
+ startColour = this.getClusterColour(nodes[edge.target.id].properties[this.clusterKey]);
+ endColour = this.getClusterColour(nodes[edge.source.id].properties[this.clusterKey]);
+ Q[id] = {
+ 'startColour': startColour,
+ 'endColour': endColour
+ };
+ }
+ }
+ }
+ _results = [];
+ for (ids in Q) {
+ gradient_id = "cluster-gradient-" + ids;
+ gradient = defs.append("svg:linearGradient").attr("id", gradient_id);
+ gradient.append("svg:stop").attr("offset", "0%").attr("stop-color", Q[ids]['startColour']);
+ _results.push(gradient.append("svg:stop").attr("offset", "100%").attr("stop-color", Q[ids]['endColour']));
+ }
+ return _results;
+ };
+
+ return clustering;
+
+ })();
+
+ alchemy.clusterControls = {
+ init: function() {
+ var changeClusterHTML;
+ changeClusterHTML = "
Cluster By:
\n";
+ d3.select("#clustering-container").append("div").attr("id", "cluster-key-container").html(changeClusterHTML).style("display", "none");
+ d3.select("#cluster_control_header").on("click", function() {
+ var display, element;
+ element = d3.select("#cluster-key-container");
+ display = element.style("display");
+ return element.style("display", function(e) {
+ if (display === "block") {
+ return "none";
+ } else {
+ return "block";
+ }
+ });
+ });
+ return d3.select("#cluster-key").on("keydown", function() {
+ if (d3.event.keyIdentifier === "Enter") {
+ alchemy.conf.cluster = true;
+ alchemy.conf.clusterKey = this.value;
+ return alchemy.generateLayout();
+ }
+ });
+ }
+ };
+
+}).call(this);
+
+(function() {
+ alchemy.controlDash = {
+ init: function() {
+ var divSelector;
+ if (alchemy.conf.showControlDash === true) {
+ divSelector = alchemy.conf.divSelector;
+ d3.select("" + divSelector).append("div").attr("id", "control-dash-wrapper").attr("class", "col-md-4 initial");
+ d3.select("#control-dash-wrapper").append("i").attr("id", "dash-toggle").attr("class", "fa fa-flask col-md-offset-12");
+ d3.select("#control-dash-wrapper").append("div").attr("id", "control-dash").attr("class", "col-md-12");
+ d3.select('#dash-toggle').on('click', alchemy.interactions.toggleControlDash);
+ alchemy.controlDash.zoomCtrl();
+ alchemy.controlDash.search();
+ alchemy.controlDash.filters();
+ alchemy.controlDash.stats();
+ return alchemy.controlDash.clustering();
+ }
+ },
+ search: function() {
+ if (alchemy.conf.search) {
+ d3.select("#control-dash").append("div").attr("id", "search").html("\n \n \n
");
+ return alchemy.search.init();
+ }
+ },
+ zoomCtrl: function() {
+ if (alchemy.conf.zoomControls) {
+ d3.select("#control-dash-wrapper").append("div").attr("id", "zoom-controls").attr("class", "col-md-offset-12").html(" ");
+ d3.select('#zoom-in').on("click", function() {
+ return alchemy.interactions.clickZoom('in');
+ });
+ d3.select('#zoom-out').on("click", function() {
+ return alchemy.interactions.clickZoom('out');
+ });
+ return d3.select('#zoom-reset').on("click", function() {
+ return alchemy.interactions.clickZoom('reset');
+ });
+ }
+ },
+ filters: function() {
+ if (alchemy.conf.showFilters) {
+ d3.select("#control-dash").append("div").attr("id", "filters");
+ return alchemy.filters.init();
+ }
+ },
+ stats: function() {
+ var stats_html;
+ if (alchemy.conf.showStats) {
+ stats_html = "\n";
+ d3.select("#control-dash").append("div").attr("id", "stats").html(stats_html).select('#stats-header').on('click', function() {
+ if (d3.select('#all-stats').classed("in")) {
+ return d3.select("#stats-header>span").attr("class", "fa fa-2x fa-caret-right");
+ } else {
+ return d3.select("#stats-header>span").attr("class", "fa fa-2x fa-caret-down");
+ }
+ });
+ return alchemy.stats.init();
+ }
+ },
+ clustering: function() {
+ var clusterControl_html;
+ if (alchemy.conf.clusterControl) {
+ clusterControl_html = "\n \n
";
+ d3.select("#control-dash").append("div").attr("id", "clustering").html(clusterControl_html).select('#cluster_control_header');
+ return alchemy.clusterControls.init();
+ }
+ }
+ };
+
+}).call(this);
+
+(function() {
+ alchemy.filters = {
+ init: function() {
+ var caption, e, edgeType, edgeTypes, nodeKey, nodeType, nodeTypes, _i, _j, _k, _len, _len1, _len2, _ref, _ref1, _ref2;
+ alchemy.filters.show();
+ if (alchemy.conf.edgeFilters) {
+ alchemy.filters.showEdgeFilters();
+ }
+ if (alchemy.conf.nodeFilters) {
+ alchemy.filters.showNodeFilters();
+ }
+ if (alchemy.conf.nodeTypes) {
+ nodeKey = Object.keys(alchemy.conf.nodeTypes);
+ nodeTypes = '';
+ _ref = alchemy.conf.nodeTypes[nodeKey];
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ nodeType = _ref[_i];
+ alchemy.state.filters.nodes["" + nodeType] = {
+ "active": true
+ };
+ caption = nodeType.replace('_', ' ');
+ nodeTypes += "" + caption + "";
+ }
+ $('#node-dropdown').append(nodeTypes);
+ }
+ if (alchemy.conf.edgeTypes) {
+ _ref1 = d3.selectAll(".edge")[0];
+ for (_j = 0, _len1 = _ref1.length; _j < _len1; _j++) {
+ e = _ref1[_j];
+ currentRelationshipTypes[[e].caption] = true;
+ }
+ edgeTypes = '';
+ _ref2 = alchemy.conf.edgeTypes;
+ for (_k = 0, _len2 = _ref2.length; _k < _len2; _k++) {
+ edgeType = _ref2[_k];
+ alchemy.state.filters.edges["" + edgeType] = {
+ "active": true
+ };
+ caption = edgeType.replace('_', ' ');
+ edgeTypes += "" + caption + "";
+ }
+ $('#rel-dropdown').append(edgeTypes);
+ }
+ if (alchemy.conf.captionsToggle) {
+ alchemy.filters.captionsToggle();
+ }
+ if (alchemy.conf.edgesToggle) {
+ alchemy.filters.edgesToggle();
+ }
+ if (alchemy.conf.nodesToggle) {
+ alchemy.filters.nodesToggle();
+ }
+ return alchemy.filters.update();
+ },
+ show: function() {
+ var filter_html;
+ filter_html = "\n ";
+ d3.select('#control-dash #filters').html(filter_html);
+ d3.selectAll('#filter-header').on('click', function() {
+ if (d3.select('#filters>form').classed("in")) {
+ return d3.select("#filter-header>span").attr("class", "fa fa-2x fa-caret-right");
+ } else {
+ return d3.select("#filter-header>span").attr("class", "fa fa-2x fa-caret-down");
+ }
+ });
+ return $('#filters form').submit(false);
+ },
+ showEdgeFilters: function() {
+ var rel_filter_html;
+ rel_filter_html = "\n";
+ $('#filters form').append(rel_filter_html);
+ return d3.select("#filter-rel-header").on('click', function() {
+ if (d3.select('#rel-dropdown').classed("in")) {
+ return d3.select("#filter-rel-header>span").attr("class", "fa fa-lg fa-caret-right");
+ } else {
+ return d3.select("#filter-rel-header>span").attr("class", "fa fa-lg fa-caret-down");
+ }
+ });
+ },
+ showNodeFilters: function() {
+ var node_filter_html;
+ node_filter_html = " ";
+ $('#filters form').append(node_filter_html);
+ return d3.select("#filter-node-header").on('click', function() {
+ if (d3.select('#node-dropdown').classed("in")) {
+ return d3.select("#filter-node-header>span").attr("class", "fa fa-lg fa-caret-right");
+ } else {
+ return d3.select("#filter-node-header>span").attr("class", "fa fa-lg fa-caret-down");
+ }
+ });
+ },
+ captionsToggle: function() {
+ return d3.select("#filters form").append("li").attr({
+ "id": "toggle-captions",
+ "class": "list-group-item active-label toggle"
+ }).html("Show Captions").on("click", function() {
+ var isDisplayed;
+ isDisplayed = d3.select("g text").attr("style");
+ if (isDisplayed === "display: block" || null) {
+ return d3.selectAll("g text").attr("style", "display: none");
+ } else {
+ return d3.selectAll("g text").attr("style", "display: block");
+ }
+ });
+ },
+ edgesToggle: function() {
+ return d3.select("#filters form").append("li").attr({
+ "id": "toggle-edges",
+ "class": "list-group-item active-label toggle"
+ }).html("Toggle Edges").on("click", function() {
+ if (d3.selectAll(".edge.hidden")[0].length === 0) {
+ return d3.selectAll(".edge").classed("hidden", true);
+ } else {
+ return d3.selectAll(".edge").classed("hidden", false);
+ }
+ });
+ },
+ nodesToggle: function() {
+ return d3.select("#filters form").append("li").attr({
+ "id": "toggle-nodes",
+ "class": "list-group-item active-label toggle"
+ }).html("Toggle Nodes").on("click", function() {
+ var affectedNodes;
+ affectedNodes = alchemy.conf.toggleRootNodes ? ".node,.edge" : ".node:not(.root),.edge";
+ if (d3.selectAll(".node.hidden")[0].length === 0) {
+ return d3.selectAll(affectedNodes).classed("hidden", true);
+ } else {
+ return d3.selectAll(affectedNodes).classed("hidden", false);
+ }
+ });
+ },
+ update: function() {
+ var identifyFilter, reFilter;
+ identifyFilter = function(element) {
+ var filterType, isDisabled, tag;
+ tag = element.attr("name");
+ isDisabled = !element.classed("disabled");
+ filterType = element.classed("nodeType") ? "nodes" : "edges";
+ return [tag, filterType, isDisabled];
+ };
+ reFilter = function(tag, filterType, isDisabled, highlight) {
+ var edge, edgeData, elements, node, _i, _j, _len, _len1, _ref, _ref1;
+ if (typeof tag === "object") {
+ return;
+ }
+ elements = d3.selectAll("." + tag);
+ elements.classed({
+ "inactive": isDisabled,
+ "highlight": highlight
+ });
+ if (filterType === "nodes") {
+ _ref = elements.data();
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ node = _ref[_i];
+ _ref1 = alchemy._nodes[node.id].adjacentEdges;
+ for (_j = 0, _len1 = _ref1.length; _j < _len1; _j++) {
+ edge = _ref1[_j];
+ edgeData = alchemy._edges[edge];
+ if (!edgeData.allNodesActive()) {
+ isDisabled = true;
+ }
+ d3.select("[source-target='" + edge + "']").classed({
+ "inactive": isDisabled,
+ "highlight": highlight
+ });
+ }
+ }
+ }
+ if (filterType === "edges") {
+ elements.classed({
+ "inactive": function(d, i) {
+ var allNodesActive;
+ allNodesActive = alchemy._edges[d.id].allNodesActive();
+ return isDisabled || !allNodesActive;
+ }
+ });
+ }
+ return alchemy.stats.update();
+ };
+ return d3.selectAll(".nodeType, .edgeType").on("mouseenter", function() {
+ var element, filterType, isDisabled, tag, _ref;
+ element = d3.select(this);
+ _ref = identifyFilter(element), tag = _ref[0], filterType = _ref[1], isDisabled = _ref[2];
+ return d3.selectAll("." + tag).classed("highlight", true);
+ }).on("mouseleave", function() {
+ var element, filterType, isDisabled, tag, _ref;
+ element = d3.select(this);
+ _ref = identifyFilter(element), tag = _ref[0], filterType = _ref[1], isDisabled = _ref[2];
+ return d3.selectAll("." + tag).classed("highlight", false);
+ }).on("click", function() {
+ var element, filterType, highlight, isDisabled, tag, _ref;
+ element = d3.select(this);
+ _ref = identifyFilter(element), tag = _ref[0], filterType = _ref[1], isDisabled = _ref[2];
+ highlight = false;
+ element.classed({
+ 'disabled': isDisabled
+ });
+ return reFilter(tag, filterType, isDisabled, highlight);
+ });
+ }
+ };
+
+}).call(this);
+
+(function() {
+ alchemy.interactions = {
+ edgeClick: function(d) {
+ var vis;
+ vis = alchemy.vis;
+ vis.selectAll('.edge').classed({
+ 'highlight': false
+ });
+ d3.select("[source-target='" + d.id + "']").classed({
+ 'highlight': true,
+ 'selected': true
+ });
+ d3.event.stopPropagation();
+ if (typeof (alchemy.conf.edgeClick != null) === 'function') {
+ return alchemy.conf.edgeClick();
+ }
+ },
+ nodeMouseOver: function(n) {
+ var node;
+ if (alchemy.conf.nodeMouseOver != null) {
+ node = alchemy._nodes[n.id];
+ if (typeof alchemy.conf.nodeMouseOver === 'function') {
+ return alchemy.conf.nodeMouseOver(node);
+ } else if (typeof alchemy.conf.nodeMouseOver === ('number' || 'string')) {
+ return node.properties[alchemy.conf.nodeMouseOver];
+ }
+ } else {
+ return null;
+ }
+ },
+ nodeMouseOut: function(n) {
+ if ((alchemy.conf.nodeMouseOut != null) && typeof alchemy.conf.nodeMouseOut === 'function') {
+ return alchemy.conf.nodeMouseOut(n);
+ } else {
+ return null;
+ }
+ },
+ nodeMouseUp: function(n) {},
+ nodeDoubleClick: function(c) {
+ var e, links, _results;
+ d3.event.stopPropagation();
+ if (!alchemy.conf.extraDataSource || c.expanded || alchemy.conf.unexpandable.indexOf(c.type === !-1)) {
+ return;
+ }
+ $('nner').show();
+ console.log("loading more data for " + c.id);
+ c.expanded = true;
+ d3.json(alchemy.conf.extraDataSource + c.id, loadMoreNodes);
+ links = findAllEdges(c);
+ _results = [];
+ for (e in edges) {
+ _results.push(edges[e].distance *= 2);
+ }
+ return _results;
+ },
+ nodeClick: function(c) {
+ var selected;
+ d3.event.stopPropagation();
+ if (!alchemy.vis.select("#node-" + c.id).empty()) {
+ selected = alchemy.vis.select("#node-" + c.id).classed('selected');
+ alchemy.vis.select("#node-" + c.id).classed('selected', !selected);
+ }
+ if (typeof alchemy.conf.nodeClick === 'function') {
+ alchemy.conf.nodeClick(c);
+ }
+ },
+ zoom: function(extent) {
+ if (this._zoomBehavior == null) {
+ this._zoomBehavior = d3.behavior.zoom();
+ }
+ return this._zoomBehavior.scaleExtent(extent).on("zoom", function() {
+ return alchemy.vis.attr("transform", "translate(" + d3.event.translate + ") scale(" + d3.event.scale + ")");
+ });
+ },
+ clickZoom: function(direction) {
+ var scale, x, y, _ref;
+ _ref = alchemy.vis.attr("transform").match(/(-*\d+\.*\d*)/g).map(function(a) {
+ return parseFloat(a);
+ }), x = _ref[0], y = _ref[1], scale = _ref[2];
+ alchemy.vis.attr("transform", function() {
+ if (direction === "in") {
+ if (scale < alchemy.conf.scaleExtent[1]) {
+ scale += 0.2;
+ }
+ return "translate(" + x + "," + y + ") scale(" + scale + ")";
+ } else if (direction === "out") {
+ if (scale > alchemy.conf.scaleExtent[0]) {
+ scale -= 0.2;
+ }
+ return "translate(" + x + "," + y + ") scale(" + scale + ")";
+ } else if (direction === "reset") {
+ return "translate(0,0) scale(1)";
+ } else {
+ return console.log('error');
+ }
+ });
+ if (this._zoomBehavior == null) {
+ this._zoomBehavior = d3.behavior.zoom();
+ }
+ return this._zoomBehavior.scale(scale).translate([x, y]);
+ },
+ toggleControlDash: function() {
+ var offCanvas;
+ offCanvas = d3.select("#control-dash-wrapper").classed("off-canvas") || d3.select("#control-dash-wrapper").classed("initial");
+ return d3.select("#control-dash-wrapper").classed({
+ "off-canvas": !offCanvas,
+ "initial": false,
+ "on-canvas": offCanvas
+ });
+ },
+ nodeDragStarted: function(d, i) {
+ d3.event.sourceEvent.stopPropagation();
+ d3.select(this).classed("dragging", true);
+ return d.fixed = true;
+ },
+ nodeDragged: function(d, i) {
+ var drawEdges, edgeIDs, id, node, selection, _i, _len, _results;
+ d.x += d3.event.dx;
+ d.y += d3.event.dy;
+ d.px += d3.event.dx;
+ d.py += d3.event.dy;
+ node = d3.select(this);
+ node.attr("transform", "translate(" + d.x + ", " + d.y + ")");
+ edgeIDs = alchemy._nodes[node.datum().id].adjacentEdges;
+ drawEdges = new alchemy.drawing.DrawEdges;
+ _results = [];
+ for (_i = 0, _len = edgeIDs.length; _i < _len; _i++) {
+ id = edgeIDs[_i];
+ selection = d3.select("g.edge[source-target='" + id + "']");
+ _results.push(drawEdges.updateEdge(selection));
+ }
+ return _results;
+ },
+ nodeDragended: function(d, i) {
+ d3.select(this).classed({
+ "dragging": false
+ });
+ if (!alchemy.conf.forceLocked) {
+ return alchemy.force.start();
+ }
+ },
+ deselectAll: function() {
+ var _ref;
+ if ((_ref = d3.event) != null ? _ref.defaultPrevented : void 0) {
+ return;
+ }
+ alchemy.vis.selectAll('.node, .edge').classed('selected highlight', false);
+ d3.select('.alchemy svg').classed({
+ 'highlight-active': false
+ });
+ if (alchemy.conf.showEditor === true) {
+ alchemy.modifyElements.nodeEditorClear();
+ }
+ alchemy.vis.selectAll('line.edge').classed('highlighted connected unconnected', false);
+ alchemy.vis.selectAll('g.node,circle,text').classed('selected unselected neighbor unconnected connecting', false);
+ if (alchemy.conf.deselectAll && typeof (alchemy.conf.deselectAll === 'function')) {
+ return alchemy.conf.deselectAll();
+ }
+ }
+ };
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.Layout = (function() {
+ function Layout() {
+ this.linkDistancefn = __bind(this.linkDistancefn, this);
+ this.tick = __bind(this.tick, this);
+ this.collide = __bind(this.collide, this);
+ this.linkStrength = __bind(this.linkStrength, this);
+ this.gravity = __bind(this.gravity, this);
+ var conf, nodes;
+ conf = alchemy.conf;
+ nodes = alchemy._nodes;
+ this.k = Math.sqrt(Math.log(_.size(alchemy._nodes)) / (conf.graphWidth() * conf.graphHeight()));
+ this._clustering = new alchemy.clustering;
+ this.d3NodeInternals = _.keys(alchemy._nodes);
+ if (conf.cluster) {
+ this._charge = function() {
+ return this._clustering.layout.charge;
+ };
+ this._linkStrength = function(edge) {
+ return this._clustering.layout.linkStrength(edge);
+ };
+ } else {
+ this._charge = function() {
+ return -10 / this.k;
+ };
+ this._linkStrength = function(edge) {
+ if (nodes[edge.source.id].properties.root || nodes[edge.target.id].properties.root) {
+ return 1;
+ } else {
+ return 0.9;
+ }
+ };
+ }
+ if (conf.cluster) {
+ this._linkDistancefn = function(edge) {
+ return this._clustering.layout.linkDistancefn(edge);
+ };
+ } else if (conf.linkDistancefn === 'default') {
+ this._linkDistancefn = function(edge) {
+ return 1 / (this.k * 50);
+ };
+ } else if (typeof conf.linkDistancefn === 'number') {
+ this._linkDistancefn = function(edge) {
+ return conf.linkDistancefn;
+ };
+ } else if (typeof conf.linkDistancefn === 'function') {
+ this._linkDistancefn = function(edge) {
+ return conf.linkDistancefn(edge);
+ };
+ }
+ }
+
+ Layout.prototype.gravity = function() {
+ if (alchemy.conf.cluster) {
+ return this._clustering.layout.gravity(this.k);
+ } else {
+ return 50 * this.k;
+ }
+ };
+
+ Layout.prototype.linkStrength = function(edge) {
+ return this._linkStrength(edge);
+ };
+
+ Layout.prototype.friction = function() {
+ if (alchemy.conf.cluster) {
+ return 0.7;
+ } else {
+ return 0.9;
+ }
+ };
+
+ Layout.prototype.collide = function(node) {
+ var conf, nx1, nx2, ny1, ny2, r;
+ node = node._d3;
+ conf = alchemy.conf;
+ r = 2 * (node.r + node['stroke-width']) + conf.nodeOverlap;
+ nx1 = node.x - r;
+ nx2 = node.x + r;
+ ny1 = node.y - r;
+ ny2 = node.y + r;
+ return function(quad, x1, y1, x2, y2) {
+ var l, x, y;
+ if (quad.point && (quad.point !== node)) {
+ x = node.x - Math.abs(quad.point.x);
+ y = node.y - quad.point.y;
+ l = Math.sqrt(x * x + y * y);
+ r = r;
+ if (l < r) {
+ l = (l - r) / l * alchemy.conf.alpha;
+ node.x -= x *= l;
+ node.y -= y *= l;
+ quad.point.x += x;
+ quad.point.y += y;
+ }
+ }
+ return x1 > nx2 || x2 < nx1 || y1 > ny2 || y2 < ny1;
+ };
+ };
+
+ Layout.prototype.tick = function() {
+ var node, q, _i, _len, _ref;
+ if (alchemy.conf.collisionDetection) {
+ q = d3.geom.quadtree(this.d3NodeInternals);
+ _ref = _.values(alchemy._nodes);
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ node = _ref[_i];
+ q.visit(this.collide(node));
+ }
+ }
+ alchemy.node.attr("transform", function(d) {
+ return "translate(" + d.x + "," + d.y + ")";
+ });
+ if (this.drawEdge == null) {
+ this.drawEdge = new alchemy.drawing.DrawEdge;
+ }
+ this.drawEdge.styleText(alchemy.edge);
+ return this.drawEdge.styleLink(alchemy.edge);
+ };
+
+ Layout.prototype.positionRootNodes = function() {
+ var conf, container, n, number, rootNodes, _i, _len, _ref, _ref1, _results;
+ conf = alchemy.conf;
+ container = {
+ width: conf.graphWidth(),
+ height: conf.graphHeight()
+ };
+ rootNodes = _.filter(alchemy._nodes, function(d) {
+ return d.properties.root;
+ });
+ if (rootNodes.length === 1) {
+ n = rootNodes[0];
+ _ref = [container.width / 2, container.width / 2], n._d3.x = _ref[0], n._d3.px = _ref[1];
+ _ref1 = [container.height / 2, container.height / 2], n._d3.y = _ref1[0], n._d3.py = _ref1[1];
+ n._d3.fixed = true;
+ } else {
+ number = 0;
+ _results = [];
+ for (_i = 0, _len = rootNodes.length; _i < _len; _i++) {
+ n = rootNodes[_i];
+ number++;
+ n._d3.x = container.width / Math.sqrt(rootNodes.length * number);
+ n._d3.y = container.height / 2;
+ _results.push(n._d3.fixed = true);
+ }
+ return _results;
+ }
+ };
+
+ Layout.prototype.chargeDistance = function() {
+ return 500;
+ };
+
+ Layout.prototype.linkDistancefn = function(edge) {
+ return this._linkDistancefn(edge);
+ };
+
+ Layout.prototype.charge = function() {
+ return this._charge();
+ };
+
+ return Layout;
+
+ })();
+
+ alchemy.generateLayout = function(start) {
+ var conf;
+ if (start == null) {
+ start = false;
+ }
+ conf = alchemy.conf;
+ alchemy.layout = new alchemy.Layout;
+ alchemy.force = d3.layout.force().size([conf.graphWidth(), conf.graphHeight()]).nodes(_.map(alchemy._nodes, function(node) {
+ return node._d3;
+ })).links(_.map(alchemy._edges, function(edge) {
+ return edge._d3;
+ }));
+ alchemy.force.charge(alchemy.layout.charge()).linkDistance(function(link) {
+ return alchemy.layout.linkDistancefn(link);
+ }).theta(1.0).gravity(alchemy.layout.gravity()).linkStrength(function(link) {
+ return alchemy.layout.linkStrength(link);
+ }).friction(alchemy.layout.friction()).chargeDistance(alchemy.layout.chargeDistance());
+ return alchemy.updateGraph();
+ };
+
+}).call(this);
+
+(function() {
+
+
+}).call(this);
+
+(function() {
+ alchemy.search = {
+ init: function() {
+ var searchBox;
+ searchBox = d3.select("#search input");
+ return searchBox.on("keyup", function() {
+ var input;
+ input = searchBox[0][0].value.toLowerCase();
+ d3.selectAll(".node").classed("inactive", false);
+ d3.selectAll("text").attr("style", function() {
+ if (input !== "") {
+ return "display: inline;";
+ }
+ });
+ return d3.selectAll(".node").classed("inactive", function(node) {
+ var DOMnode, hidden;
+ DOMnode = d3.select(this);
+ if (alchemy.conf.searchMethod === "contains") {
+ hidden = DOMnode.text().toLowerCase().indexOf(input) < 0;
+ }
+ if (alchemy.conf.searchMethod === "begins") {
+ hidden = DOMnode.text().toLowerCase().indexOf(input) !== 0;
+ }
+ if (hidden) {
+ d3.selectAll("[source-target*='" + node.id + "']").classed("inactive", hidden);
+ } else {
+ d3.selectAll("[source-target*='" + node.id + "']").classed("inactive", function(edge) {
+ var nodeIDs, sourceHidden, targetHidden;
+ nodeIDs = [edge.source.id, edge.target.id];
+ sourceHidden = d3.select("#node-" + nodeIDs[0]).classed("inactive");
+ targetHidden = d3.select("#node-" + nodeIDs[1]).classed("inactive");
+ return targetHidden || sourceHidden;
+ });
+ }
+ return hidden;
+ });
+ });
+ }
+ };
+
+}).call(this);
+
+(function() {
+ alchemy.startGraph = function(data) {
+ var arrowSize, conf, defs, editor, editorInteractions, marker;
+ conf = alchemy.conf;
+ if (d3.select(conf.divSelector).empty()) {
+ console.warn(alchemy.utils.warnings.divWarning());
+ }
+ if (!data) {
+ alchemy.utils.warnings.dataWarning();
+ }
+ alchemy._nodes = {};
+ alchemy._edges = {};
+ data.nodes.forEach(function(n) {
+ return alchemy._nodes[n.id] = new alchemy.models.Node(n);
+ });
+ data.edges.forEach(function(e) {
+ var edge;
+ edge = new alchemy.models.Edge(e);
+ return alchemy._edges[edge.id] = edge;
+ });
+ alchemy.vis = d3.select(conf.divSelector).attr("style", "width:" + (conf.graphWidth()) + "px; height:" + (conf.graphHeight()) + "px").append("svg").attr("xmlns", "http://www.w3.org/2000/svg").attr("pointer-events", "all").on("dblclick.zoom", null).on('click', alchemy.interactions.deselectAll).call(alchemy.interactions.zoom(conf.scaleExtent)).append('g').attr("transform", "translate(" + conf.initialTranslate + ") scale(" + conf.initialScale + ")");
+ editorInteractions = new alchemy.editor.Interactions;
+ d3.select("body").on('keydown', editorInteractions.deleteSelected);
+ alchemy.generateLayout();
+ alchemy.controlDash.init();
+ if (!conf.forceLocked) {
+ alchemy.force.on("tick", alchemy.layout.tick).start();
+ }
+ if (conf.afterLoad != null) {
+ if (typeof conf.afterLoad === 'function') {
+ conf.afterLoad();
+ } else if (typeof conf.afterLoad === 'string') {
+ alchemy[conf.afterLoad] = true;
+ }
+ }
+ if (conf.initialScale !== alchemy.defaults.initialScale) {
+ alchemy.interactions.zoom().scale(conf.initialScale);
+ return;
+ }
+ if (conf.initialTranslate !== alchemy.defaults.initialTranslate) {
+ alchemy.interactions.zoom().translate(conf.initialTranslate);
+ return;
+ }
+ if (conf.cluster || conf.directedEdges) {
+ defs = d3.select("" + alchemy.conf.divSelector + " svg").append("svg:defs");
+ }
+ if (conf.directedEdges) {
+ arrowSize = conf.edgeArrowSize;
+ marker = defs.append("svg:marker").attr("id", "arrow").attr("viewBox", "0 -" + (arrowSize * 0.4) + " " + arrowSize + " " + arrowSize).attr('markerUnits', 'userSpaceOnUse').attr("markerWidth", arrowSize).attr("markerHeight", arrowSize).attr("orient", "auto");
+ marker.append("svg:path").attr("d", "M " + arrowSize + ",0 L 0," + (arrowSize * 0.4) + " L 0,-" + (arrowSize * 0.4));
+ if (conf.curvedEdges) {
+ marker.attr("refX", arrowSize + 1);
+ } else {
+ marker.attr('refX', 1);
+ }
+ }
+ if (conf.showEditor) {
+ editor = new alchemy.editor.Editor;
+ return editor.startEditor();
+ }
+ };
+
+}).call(this);
+
+(function() {
+ alchemy.stats = {
+ init: function() {
+ return alchemy.stats.update();
+ },
+ nodeStats: function() {
+ var activeNodes, caption, inactiveNodes, nodeGraph, nodeKey, nodeNum, nodeStats, nodeType, nodeTypes, _i, _len, _ref;
+ nodeStats = '';
+ nodeNum = d3.selectAll(".node")[0].length;
+ activeNodes = d3.selectAll(".node.active")[0].length;
+ inactiveNodes = d3.selectAll(".node.inactive")[0].length;
+ nodeStats += "Number of nodes: " + nodeNum + "";
+ nodeStats += "Number of active nodes: " + activeNodes + "";
+ nodeStats += "Number of inactive nodes: " + inactiveNodes + "";
+ if (alchemy.conf.nodeTypes) {
+ nodeKey = Object.keys(alchemy.conf.nodeTypes);
+ nodeTypes = '';
+ _ref = alchemy.conf.nodeTypes[nodeKey];
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ nodeType = _ref[_i];
+ caption = nodeType.replace('_', ' ');
+ nodeNum = d3.selectAll("g.node." + nodeType)[0].length;
+ nodeTypes += "Number of nodes of type " + caption + ": " + nodeNum + "";
+ }
+ nodeStats += nodeTypes;
+ }
+ nodeGraph = "";
+ nodeStats += nodeGraph;
+ return $('#node-stats').html(nodeStats);
+ },
+ edgeStats: function() {
+ var activeEdges, caption, e, edgeData, edgeGraph, edgeNum, edgeType, inactiveEdges, _i, _j, _len, _len1, _ref, _ref1;
+ edgeData = null;
+ edgeNum = d3.selectAll(".edge")[0].length;
+ activeEdges = d3.selectAll(".edge.active")[0].length;
+ inactiveEdges = d3.selectAll(".edge.inactive")[0].length;
+ edgeGraph = "Number of relationships: " + edgeNum + " Number of active relationships: " + activeEdges + " Number of inactive relationships: " + inactiveEdges + " ";
+ if (alchemy.conf.edgeTypes) {
+ edgeData = [];
+ _ref = d3.selectAll(".edge")[0];
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ e = _ref[_i];
+ currentRelationshipTypes[[e].caption] = true;
+ }
+ _ref1 = alchemy.conf.edgeTypes;
+ for (_j = 0, _len1 = _ref1.length; _j < _len1; _j++) {
+ edgeType = _ref1[_j];
+ if (!edgeType) {
+ continue;
+ }
+ caption = edgeType.replace('_', ' ');
+ edgeNum = d3.selectAll(".edge." + edgeType)[0].length;
+ edgeData.push(["" + caption, edgeNum]);
+ }
+ }
+ $('#rel-stats').html(edgeGraph);
+ alchemy.stats.insertSVG("edge", edgeData);
+ return edgeData;
+ },
+ nodeStats: function() {
+ var activeNodes, inactiveNodes, nodeData, nodeGraph, nodeKey, nodeNum, nodeType, totalNodes, _i, _len, _ref;
+ nodeData = null;
+ totalNodes = d3.selectAll(".node")[0].length;
+ activeNodes = d3.selectAll(".node.active")[0].length;
+ inactiveNodes = d3.selectAll(".node.inactive")[0].length;
+ if (alchemy.conf.nodeTypes) {
+ nodeData = [];
+ nodeKey = Object.keys(alchemy.conf.nodeTypes);
+ _ref = alchemy.conf.nodeTypes[nodeKey];
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ nodeType = _ref[_i];
+ nodeNum = d3.selectAll("g.node." + nodeType)[0].length;
+ nodeData.push(["" + nodeType, nodeNum]);
+ }
+ }
+ nodeGraph = "Number of nodes: " + totalNodes + " Number of active nodes: " + activeNodes + " Number of inactive nodes: " + inactiveNodes + " ";
+ $('#node-stats').html(nodeGraph);
+ alchemy.stats.insertSVG("node", nodeData);
+ return nodeData;
+ },
+ insertSVG: function(element, data) {
+ var arc, arcs, color, height, pie, radius, svg, width;
+ if (data === null) {
+ return d3.select("#" + element + "-stats-graph").html("
There are no " + element + "Types listed in your conf.
");
+ } else {
+ width = alchemy.conf.graphWidth() * .25;
+ height = 250;
+ radius = width / 4;
+ color = d3.scale.category20();
+ arc = d3.svg.arc().outerRadius(radius - 10).innerRadius(radius / 2);
+ pie = d3.layout.pie().sort(null).value(function(d) {
+ return d[1];
+ });
+ svg = d3.select("#" + element + "-stats-graph").append("svg").append("g").style({
+ "width": width,
+ "height": height
+ }).attr("transform", "translate(" + width / 2 + "," + height / 2 + ")");
+ arcs = svg.selectAll(".arc").data(pie(data)).enter().append("g").classed("arc", true).on("mouseover", function(d, i) {
+ return d3.select("#" + data[i][0] + "-stat").classed("hidden", false);
+ }).on("mouseout", function(d, i) {
+ return d3.select("#" + data[i][0] + "-stat").classed("hidden", true);
+ });
+ arcs.append("path").attr("d", arc).attr("stroke", function(d, i) {
+ return color(i);
+ }).attr("stroke-width", 2).attr("fill-opacity", "0.3");
+ return arcs.append("text").attr("transform", function(d) {
+ return "translate(" + arc.centroid(d) + ")";
+ }).attr("id", function(d, i) {
+ return "" + data[i][0] + "-stat";
+ }).attr("dy", ".35em").classed("hidden", true).text(function(d, i) {
+ return data[i][0];
+ });
+ }
+ },
+ update: function() {
+ if (alchemy.conf.nodeStats === true) {
+ alchemy.stats.nodeStats();
+ }
+ if (alchemy.conf.edgeStats === true) {
+ return alchemy.stats.edgeStats();
+ }
+ }
+ };
+
+}).call(this);
+
+(function() {
+ alchemy.updateGraph = function(start) {
+ var drawEdges, drawNodes, initialComputationDone;
+ if (start == null) {
+ start = true;
+ }
+ alchemy.edge = alchemy.vis.selectAll("g.edge").data(_.map(alchemy._edges, function(e) {
+ return e._d3;
+ }), function(e) {
+ return e.id;
+ });
+ alchemy.node = alchemy.vis.selectAll("g.node").data(_.map(alchemy._nodes, function(n) {
+ return n._d3;
+ }), function(n) {
+ return n.id;
+ });
+ if (start) {
+ alchemy.layout.positionRootNodes();
+ this.force.start();
+ while (this.force.alpha() > 0.005) {
+ alchemy.force.tick();
+ }
+ drawEdges = new alchemy.drawing.DrawEdges;
+ drawEdges.createEdge(alchemy.edge);
+ drawNodes = new alchemy.drawing.DrawNodes;
+ drawNodes.createNode(alchemy.node);
+ initialComputationDone = true;
+ console.log(Date() + ' completed initial computation');
+ }
+ alchemy.vis.selectAll('g.node').attr('transform', function(id, i) {
+ return "translate(" + id.x + ", " + id.y + ")";
+ });
+ return alchemy.node.exit().remove();
+ };
+
+}).call(this);
+
+(function() {
+ alchemy.defaults = {
+ graphWidth: function() {
+ return d3.select(this.divSelector).node().parentElement.clientWidth;
+ },
+ graphHeight: function() {
+ if (d3.select(this.divSelector).node().parentElement.nodeName === "BODY") {
+ return window.innerHeight;
+ } else {
+ return d3.select(this.divSelector).node().parentElement.clientHeight;
+ }
+ },
+ alpha: 0.5,
+ collisionDetection: true,
+ nodeOverlap: 25,
+ fixNodes: false,
+ fixRootNodes: false,
+ forceLocked: true,
+ linkDistancefn: 'default',
+ nodePositions: null,
+ showEditor: false,
+ captionToggle: false,
+ toggleRootNodes: false,
+ removeElement: false,
+ showControlDash: false,
+ cluster: false,
+ clusterKey: "cluster",
+ clusterColours: d3.shuffle(["#DD79FF", "#FFFC00", "#00FF30", "#5168FF", "#00C0FF", "#FF004B", "#00CDCD", "#f83f00", "#f800df", "#ff8d8f", "#ffcd00", "#184fff", "#ff7e00"]),
+ clusterControl: true,
+ showStats: false,
+ nodeStats: false,
+ edgeStats: false,
+ showFilters: false,
+ edgeFilters: false,
+ nodeFilters: false,
+ edgesToggle: false,
+ nodesToggle: false,
+ zoomControls: false,
+ nodeCaption: 'caption',
+ nodeStyle: {},
+ nodeColour: null,
+ nodeMouseOver: 'caption',
+ nodeRadius: 10,
+ nodeTypes: null,
+ rootNodes: 'root',
+ rootNodeRadius: 15,
+ edgeCaption: 'caption',
+ edgeClick: 'default',
+ edgeStyle: function(d) {
+ return null;
+ },
+ edgeTypes: null,
+ curvedEdges: false,
+ edgeWidth: 4,
+ edgeOverlayWidth: 20,
+ directedEdges: false,
+ edgeArrowSize: 5,
+ search: true,
+ searchMethod: "contains",
+ afterLoad: 'afterLoad',
+ divSelector: '#alchemy',
+ dataSource: null,
+ initialScale: 1,
+ initialTranslate: [0, 0],
+ scaleExtent: [0.5, 2.4],
+ dataWarning: "default",
+ warningMessage: "There be no data! What's going on?"
+ };
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.drawing.DrawEdge = (function() {
+ function DrawEdge(utils) {
+ this.setInteractions = __bind(this.setInteractions, this);
+ this.styleText = __bind(this.styleText, this);
+ this.classEdge = __bind(this.classEdge, this);
+ this.styleLink = __bind(this.styleLink, this);
+ this.createLink = __bind(this.createLink, this);
+ var conf;
+ conf = alchemy.conf;
+ this.curved = conf.curvedEdges;
+ this.directed = conf.directedEdges;
+ this.utils = new alchemy.drawing.EdgeUtils;
+ }
+
+ DrawEdge.prototype.createLink = function(edge) {
+ var conf, interactions, utils;
+ conf = alchemy.conf;
+ interactions = alchemy.interactions;
+ utils = this.utils;
+ if (this.curved) {
+ edge.append('path').attr('class', 'edge-line').attr('id', function(d) {
+ return "path-" + d.id;
+ });
+ edge.filter(function(d) {
+ return d.caption != null;
+ }).append('text');
+ return edge.append('path').attr('class', 'edge-handler').style('stroke-width', "" + conf.edgeOverlayWidth);
+ } else {
+ edge.append('line').attr('class', 'edge-line').attr('shape-rendering', 'optimizeSpeed').style('stroke', function(d) {
+ return utils.edgeStyle(d);
+ }).style('stroke-width', conf.edgeWidth);
+ edge.filter(function(d) {
+ return d.caption != null;
+ }).append('text');
+ return edge.append('rect').attr('class', 'edge-handler');
+ }
+ };
+
+ DrawEdge.prototype.styleLink = function(edge) {
+ var conf, utils;
+ conf = alchemy.conf;
+ utils = this.utils;
+ if (this.curved) {
+ edge.selectAll('path').attr('d', function(d) {
+ var dx, dy, endLine, hyp, sourceX, sourceY, startLine, targetX, targetY;
+ startLine = utils.startLine(d);
+ endLine = utils.endLine(d);
+ sourceX = startLine.x;
+ sourceY = startLine.y;
+ targetX = endLine.x;
+ targetY = endLine.y;
+ dx = targetX - sourceX;
+ dy = targetY - sourceY;
+ hyp = Math.sqrt(dx * dx + dy * dy);
+ return "M " + sourceX + "," + sourceY + " A " + hyp + ", " + hyp + " " + (utils.captionAngle(d)) + " 0, 1 " + targetX + ", " + targetY;
+ });
+ edge.select('path.edge-line').style('stroke', function(d) {
+ return utils.edgeStyle(d);
+ });
+ } else {
+ edge.select('.edge-line').each(function(d) {
+ var endLine, startLine;
+ startLine = utils.startLine(d);
+ endLine = utils.endLine(d);
+ return d3.select(this).attr({
+ 'x1': startLine.x,
+ 'y1': startLine.y,
+ 'x2': endLine.x,
+ 'y2': endLine.y
+ });
+ });
+ edge.select('.edge-handler').attr('x', 0).attr('y', -conf.edgeOverlayWidth / 2).attr('height', conf.edgeOverlayWidth).attr('width', function(d) {
+ return utils.edgeLength(d);
+ }).attr('transform', function(d) {
+ return "translate(" + d.source.x + ", " + d.source.y + ") rotate(" + (utils.edgeAngle(d)) + ")";
+ });
+ }
+ if (this.directed) {
+ return edge.select('.edge-line').attr('marker-end', 'url(#arrow)');
+ }
+ };
+
+ DrawEdge.prototype.classEdge = function(edge) {
+ return edge.classed('active', true);
+ };
+
+ DrawEdge.prototype.styleText = function(edge) {
+ var utils;
+ utils = this.utils;
+ if (this.curved) {
+ return edge.select('text').attr('dx', function(d) {
+ return utils.middlePath(d).x;
+ }).attr('dy', function(d) {
+ return utils.middlePath(d).y + 20;
+ }).attr('transform', function(d) {
+ return "rotate(" + (utils.captionAngle(d)) + " " + (utils.middlePath(d).x) + " " + (utils.middlePath(d).y) + ")";
+ }).text(function(d) {
+ return d.caption;
+ });
+ } else {
+ return edge.select('text').attr('dx', function(d) {
+ return utils.middleLine(d).x;
+ }).attr('dy', function(d) {
+ return utils.middleLine(d).y - 5;
+ }).attr('transform', function(d) {
+ return "rotate(" + (utils.captionAngle(d)) + " " + (utils.middleLine(d).x) + " " + (utils.middleLine(d).y) + ")";
+ }).text(function(d) {
+ return d.caption;
+ });
+ }
+ };
+
+ DrawEdge.prototype.setInteractions = function(edge) {
+ var editorEnabled, editorInteractions;
+ editorEnabled = alchemy.getState("interactions") === "editor";
+ if (editorEnabled) {
+ editorInteractions = new alchemy.editor.Interactions;
+ return edge.select('.edge-handler').on('click', editorInteractions.edgeClick);
+ } else {
+ return edge.select('.edge-handler').on('click', alchemy.interactions.edgeClick);
+ }
+ };
+
+ return DrawEdge;
+
+ })();
+
+}).call(this);
+
+(function() {
+ alchemy.drawing.DrawEdges = (function() {
+ function DrawEdges() {
+ this.utils = new alchemy.drawing.EdgeUtils;
+ this.drawEdge = new alchemy.drawing.DrawEdge(this.utils);
+ }
+
+ DrawEdges.prototype.createEdge = function(edge) {
+ edge.enter().append('g').attr("id", function(d) {
+ return "edge-" + d.id;
+ }).attr('class', function(d) {
+ var edgeType;
+ edgeType = alchemy._edges[d.id].properties.caption;
+ return "edge " + edgeType;
+ }).attr('source-target', function(d) {
+ return "" + d.source.id + "-" + d.target.id;
+ });
+ this.drawEdge.createLink(edge);
+ this.drawEdge.classEdge(edge);
+ this.drawEdge.styleLink(edge);
+ this.drawEdge.styleText(edge);
+ this.drawEdge.setInteractions(edge);
+ return edge.exit().remove();
+ };
+
+ DrawEdges.prototype.updateEdge = function(edge) {
+ this.drawEdge.classEdge(edge);
+ this.drawEdge.styleLink(edge);
+ this.drawEdge.styleText(edge);
+ return this.drawEdge.setInteractions(edge);
+ };
+
+ return DrawEdges;
+
+ })();
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.drawing.DrawNode = (function() {
+ function DrawNode() {
+ this.styleNode = __bind(this.styleNode, this);
+ this.setInteractions = __bind(this.setInteractions, this);
+ this.createNode = __bind(this.createNode, this);
+ this.styleText = __bind(this.styleText, this);
+ var conf, interactions, nodes, utils;
+ interactions = alchemy.interactions;
+ conf = alchemy.conf;
+ nodes = alchemy._nodes;
+ interactions = alchemy.interactions;
+ this.utils = new alchemy.drawing.NodeUtils;
+ utils = this.utils;
+ this._styleText = function(node) {
+ return node.selectAll("text").attr('dy', function(d) {
+ if (nodes[d.id].properties.root) {
+ return conf.rootNodeRadius / 2;
+ } else {
+ return conf.nodeRadius * 2 - 5;
+ }
+ }).html(function(d) {
+ return utils.nodeText(d);
+ });
+ };
+ this._createNode = function(node) {
+ node.append('circle').attr('id', function(d) {
+ return "circle-" + d.id;
+ });
+ return node.append('svg:text').attr('id', function(d) {
+ return "text-" + d.id;
+ });
+ };
+ this._styleNode = function(node) {
+ return node.select('circle').attr('r', function(d) {
+ return d.r;
+ }).attr('shape-rendering', 'optimizeSpeed').attr('style', function(d) {
+ return utils.nodeStyle(d);
+ });
+ };
+ this._setInteractions = function(node) {
+ var coreInteractions, drag, editorEnabled, editorInteractions, nonRootNodes, rootNodes;
+ editorEnabled = alchemy.getState("interactions") === "editor";
+ coreInteractions = alchemy.interactions;
+ drag = d3.behavior.drag().origin(Object).on("dragstart", null).on("drag", null).on("dragend", null);
+ if (editorEnabled) {
+ editorInteractions = new alchemy.editor.Interactions;
+ return node.on('mouseup', editorInteractions.nodeMouseUp).on('mouseover', editorInteractions.nodeMouseOver).on('mouseout', editorInteractions.nodeMouseOut).on('dblclick', coreInteractions.nodeDoubleClick).on('click', editorInteractions.nodeClick);
+ } else {
+ node.on('mouseup', null).on('mouseover', coreInteractions.nodeMouseOver).on('mouseout', coreInteractions.nodeMouseOut).on('dblclick', coreInteractions.nodeDoubleClick).on('click', coreInteractions.nodeClick);
+ drag = d3.behavior.drag().origin(Object).on("dragstart", coreInteractions.nodeDragStarted).on("drag", coreInteractions.nodeDragged).on("dragend", coreInteractions.nodeDragended);
+ if (!conf.fixNodes) {
+ nonRootNodes = node.filter(function(d) {
+ return d.root !== true;
+ });
+ nonRootNodes.call(drag);
+ }
+ if (!conf.fixRootNodes) {
+ rootNodes = node.filter(function(d) {
+ return d.root === true;
+ });
+ return rootNodes.call(drag);
+ }
+ }
+ };
+ }
+
+ DrawNode.prototype.styleText = function(node) {
+ return this._styleText(node);
+ };
+
+ DrawNode.prototype.createNode = function(node) {
+ return this._createNode(node);
+ };
+
+ DrawNode.prototype.setInteractions = function(node) {
+ return this._setInteractions(node);
+ };
+
+ DrawNode.prototype.styleNode = function(node) {
+ return this._styleNode(node);
+ };
+
+ return DrawNode;
+
+ })();
+
+}).call(this);
+
+(function() {
+ alchemy.drawing.DrawNodes = (function() {
+ function DrawNodes() {
+ this.drawNode = new alchemy.drawing.DrawNode;
+ }
+
+ DrawNodes.prototype.createNode = function(node) {
+ node.enter().append("g").attr("class", function(d) {
+ var node_data;
+ node_data = alchemy._nodes[d.id].getProperties();
+ if (d.nodeType != null) {
+ return "node " + d.nodeType + " active";
+ } else {
+ return "node active";
+ }
+ }).attr('id', function(d) {
+ return "node-" + d.id;
+ }).classed('root', function(d) {
+ return d.root;
+ });
+ this.drawNode.createNode(node);
+ this.drawNode.styleNode(node);
+ this.drawNode.styleText(node);
+ this.drawNode.setInteractions(node);
+ return node.exit().remove();
+ };
+
+ DrawNodes.prototype.updateNode = function(node) {
+ this.drawNode.styleNode(node);
+ this.drawNode.styleText(node);
+ return this.drawNode.setInteractions(node);
+ };
+
+ return DrawNodes;
+
+ })();
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.drawing.EdgeUtils = (function() {
+ function EdgeUtils() {
+ this.captionAngle = __bind(this.captionAngle, this);
+ var caption, clustering, conf, edges, hyp, nodes, square;
+ conf = alchemy.conf;
+ nodes = alchemy._nodes;
+ edges = alchemy._edges;
+ if (alchemy.conf.cluster) {
+ clustering = alchemy.layout._clustering;
+ this.edgeStyle = function(d) {
+ var clusterKey, gid, id, index;
+ clusterKey = alchemy.conf.clusterKey;
+ if (nodes[d.source.id].properties.root || nodes[d.target.id].properties.root) {
+ index = (nodes[d.source.id].properties.root ? nodes[d.target.id].properties[clusterKey] : nodes[d.source.id].properties[clusterKey]);
+ return "" + (clustering.getClusterColour(index));
+ } else if (nodes[d.source.id].properties[clusterKey] === nodes[d.target.id].properties[clusterKey]) {
+ index = nodes[d.source.id].properties[clusterKey];
+ return "" + (clustering.getClusterColour(index));
+ } else if (nodes[d.source.id].properties[clusterKey] !== nodes[d.target.id].properties[clusterKey]) {
+ id = "" + nodes[d.source.id].properties[clusterKey] + "-" + nodes[d.target.id].properties[clusterKey];
+ gid = "cluster-gradient-" + id;
+ return "url(#" + gid + ")";
+ }
+ };
+ } else if ((alchemy.conf.edgeStyle != null) && !alchemy.conf.cluster) {
+ this.edgeStyle = function(d) {
+ return "" + (alchemy.conf.edgeStyle(d));
+ };
+ } else {
+ this.edgeStyle = function(d) {
+ return "";
+ };
+ }
+ square = function(n) {
+ return n * n;
+ };
+ hyp = function(edge) {
+ var height, width;
+ width = edge.target.x - edge.source.x;
+ height = edge.target.y - edge.source.y;
+ return Math.sqrt(height * height + width * width);
+ };
+ this._edgeWalk = function(edge, point) {
+ var distance, height, width;
+ width = edge.target.x - edge.source.x;
+ height = edge.target.y - edge.source.y;
+ hyp = Math.sqrt(height * height + width * width);
+ if (point === 'middle') {
+ distance = hyp / 2;
+ return {
+ x: edge.source.x + width * distance / hyp,
+ y: edge.source.y + height * distance / hyp
+ };
+ } else if (point === 'linkStart') {
+ if (conf.curvedEdges) {
+ return {
+ x: edge.source.x,
+ y: edge.source.y
+ };
+ } else {
+ distance = edge.source.r + edge.source['stroke-width'];
+ return {
+ x: edge.source.x + width * distance / hyp,
+ y: edge.source.y + height * distance / hyp
+ };
+ }
+ } else if (point === 'linkEnd') {
+ if (conf.curvedEdges) {
+ distance = hyp;
+ } else {
+ distance = hyp - (edge.target.r + edge.target['stroke-width']);
+ }
+ if (conf.directedEdges) {
+ distance = distance - conf.edgeArrowSize;
+ }
+ return {
+ x: edge.source.x + width * distance / hyp,
+ y: edge.source.y + height * distance / hyp
+ };
+ }
+ };
+ caption = alchemy.conf.edgeCaption;
+ if (typeof caption === ('string' || 'number')) {
+ this.edgeCaption = function(d) {
+ return edges[d.id].properties[caption];
+ };
+ } else if (typeof caption === 'function') {
+ this.edgeCaption = function(d) {
+ return caption(edges[d.id]);
+ };
+ }
+ }
+
+ EdgeUtils.prototype.middleLine = function(edge) {
+ return this._edgeWalk(edge, 'middle');
+ };
+
+ EdgeUtils.prototype.startLine = function(edge) {
+ return this._edgeWalk(edge, 'linkStart');
+ };
+
+ EdgeUtils.prototype.endLine = function(edge) {
+ return this._edgeWalk(edge, 'linkEnd');
+ };
+
+ EdgeUtils.prototype.edgeLength = function(edge) {
+ var height, hyp, width;
+ width = edge.target.x - edge.source.x;
+ height = edge.target.y - edge.source.y;
+ return hyp = Math.sqrt(height * height + width * width);
+ };
+
+ EdgeUtils.prototype.edgeAngle = function(edge) {
+ var height, width;
+ width = edge.target.x - edge.source.x;
+ height = edge.target.y - edge.source.y;
+ return Math.atan2(height, width) / Math.PI * 180;
+ };
+
+ EdgeUtils.prototype.captionAngle = function(edge) {
+ var angle;
+ angle = this.edgeAngle(edge);
+ if (angle < -90 || angle > 90) {
+ return angle += 180;
+ } else {
+ return angle;
+ }
+ };
+
+ EdgeUtils.prototype.hyp = function(edge) {
+ return hyp(edge);
+ };
+
+ EdgeUtils.prototype.middlePath = function(edge) {
+ var midPoint, pathNode;
+ pathNode = d3.select("#path-" + edge.id).node();
+ midPoint = pathNode.getPointAtLength(pathNode.getTotalLength() / 2);
+ return {
+ x: midPoint.x,
+ y: midPoint.y
+ };
+ };
+
+ return EdgeUtils;
+
+ })();
+
+}).call(this);
+
+(function() {
+ alchemy.drawing.NodeUtils = (function() {
+ function NodeUtils() {
+ var conf, nodes;
+ nodes = alchemy._nodes;
+ conf = alchemy.conf;
+ if (conf.cluster) {
+ this.nodeColours = function(d) {
+ var clusterKey, clusterMap, colour, colourIndex, node_data;
+ node_data = alchemy._nodes[d.id].properties;
+ clusterMap = alchemy.layout._clustering.clusterMap;
+ clusterKey = alchemy.conf.clusterKey;
+ colourIndex = clusterMap[node_data[clusterKey]] % conf.clusterColours.length;
+ colour = conf.clusterColours[colourIndex];
+ return "" + colour;
+ };
+ } else {
+ this.nodeColours = function(d) {
+ var colour;
+ if (conf.nodeColour) {
+ return colour = conf.nodeColour;
+ } else {
+ return '';
+ }
+ };
+ }
+ }
+
+ NodeUtils.prototype.nodeStyle = function(d) {
+ var color, stroke;
+ color = this.nodeColours(d);
+ stroke = alchemy.getState("interactions") === "editor" ? "#E82C0C" : color;
+ return "fill: " + color + "; stroke: " + color + "; stroke-width: " + d['stroke-width'] + ";";
+ };
+
+ NodeUtils.prototype.nodeText = function(d) {
+ var caption, node;
+ node = alchemy._nodes[d.id];
+ if (alchemy.conf.nodeCaption && typeof alchemy.conf.nodeCaption === 'string') {
+ if (node.properties[alchemy.conf.nodeCaption] != null) {
+ return node.properties[alchemy.conf.nodeCaption];
+ } else {
+ return '';
+ }
+ } else if (alchemy.conf.nodeCaption && typeof alchemy.conf.nodeCaption === 'function') {
+ caption = alchemy.conf.nodeCaption(node);
+ if (caption === void 0 || String(caption) === 'undefined') {
+ alchemy.log["caption"] = "At least one caption returned undefined";
+ alchemy.conf.caption = false;
+ }
+ return caption;
+ }
+ };
+
+ return NodeUtils;
+
+ })();
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.editor.Editor = (function() {
+ function Editor() {
+ this.nodeEditor = __bind(this.nodeEditor, this);
+ this.startEditor = __bind(this.startEditor, this);
+ this.utils = new alchemy.editor.Utils;
+ }
+
+ Editor.prototype.editorContainerHTML = "\n\n
\n - Remove Selected
\n - Editor mode enabled, click to disable editor interactions
\n
\n
";
+
+ Editor.prototype.elementEditorHTML = function(type) {
+ return "" + type + " Editor
\n\n";
+ };
+
+ Editor.prototype.startEditor = function() {
+ var divSelector, editor, editor_interactions, html, utils;
+ divSelector = alchemy.conf.divSelector;
+ html = this.editorContainerHTML;
+ editor = d3.select("" + divSelector + " #control-dash").append("div").attr("id", "editor").html(html);
+ editor.select('#editor-header').on('click', function() {
+ if (d3.select('#element-options').classed("in")) {
+ return d3.select("#editor-header>span").attr("class", "fa fa-2x fa-caret-right");
+ } else {
+ return d3.select("#editor-header>span").attr("class", "fa fa-2x fa-caret-down");
+ }
+ });
+ editor_interactions = editor.select('#element-options ul #editor-interactions').on('click', function() {
+ return d3.select(this).attr("class", function() {
+ if (alchemy.getState() === 'editor') {
+ alchemy.setState('interactions', 'default');
+ return "inactive list-group-item";
+ } else {
+ alchemy.setState('interactions', 'editor');
+ return "active list-group-item";
+ }
+ }).html(function() {
+ if (alchemy.getState() === 'editor') {
+ return "Disable Editor Interactions";
+ } else {
+ return "Enable Editor Interactions";
+ }
+ });
+ });
+ editor.select("#element-options ul #remove").on("click", function() {
+ return alchemy.editor.remove();
+ });
+ utils = this.utils;
+ return editor_interactions.on("click", function() {
+ if (!d3.select("#editor-interactions").classed("active")) {
+ utils.enableEditor();
+ return d3.select("#editor-interactions").classed({
+ "active": true,
+ "inactive": false
+ }).html("Editor mode enabled, click to disable editor interactions");
+ } else {
+ utils.disableEditor();
+ return d3.select("#editor-interactions").classed({
+ "active": false,
+ "inactive": true
+ }).html("Editor mode disabled, click to enable editor interactions");
+ }
+ });
+ };
+
+ Editor.prototype.nodeEditor = function(n) {
+ var add_property, divSelector, editor, elementEditor, html, nodeProperties, node_property, options, property, property_list, updateProperty, val;
+ divSelector = alchemy.conf.divSelector;
+ editor = d3.select("" + divSelector + " #control-dash-wrapper #control-dash #editor");
+ options = editor.select('#element-options');
+ html = this.elementEditorHTML("Node");
+ elementEditor = options.append('div').attr('id', 'node-editor').html(html);
+ elementEditor.attr("class", function() {
+ if (d3.select("#editor-interactions").classed("active")) {
+ return "enabled";
+ } else {
+ return "hidden";
+ }
+ });
+ add_property = editor.select("#node-editor form #add-property");
+ add_property.select("#node-add-prop-key").attr("placeholder", "New Property Name").attr("value", null);
+ add_property.select("#node-add-prop-value").attr("placeholder", "New Property Value").attr("value", null);
+ d3.select("#add-property-form").on("submit", function() {
+ var key, value;
+ event.preventDefault();
+ key = d3.select('#add-prop-key').property('value');
+ key = key.replace(/\s/g, "_");
+ value = d3.select('#add-prop-value').property('value');
+ updateProperty(key, value, true);
+ d3.selectAll("#add-property .edited-property").classed({
+ "edited-property": false
+ });
+ return this.reset();
+ });
+ nodeProperties = alchemy._nodes[n.id].getProperties();
+ d3.select("#node-" + n.id).classed({
+ "editing": true
+ });
+ property_list = editor.select("#node-editor #properties-list");
+ for (property in nodeProperties) {
+ val = nodeProperties[property];
+ node_property = property_list.append("div").attr("id", "node-" + property).attr("class", "property form-inline form-group");
+ node_property.append("label").attr("for", "node-" + property + "-input").attr("class", "form-control property-name").text("" + property);
+ node_property.append("input").attr("id", "node-" + property + "-input").attr("class", "form-control property-value").attr("value", "" + val);
+ }
+ d3.select("#properties-list").on("submit", function() {
+ var key, properties, selection, value, _i, _len, _ref;
+ event.preventDefault();
+ properties = d3.selectAll(".edited-property");
+ _ref = properties[0];
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ property = _ref[_i];
+ selection = d3.select(property);
+ key = selection.select("label").text();
+ value = selection.select("input").attr('value');
+ updateProperty(key, value, false);
+ }
+ d3.selectAll("#node-properties-list .edited-property").classed({
+ "edited-property": false
+ });
+ return this.reset();
+ });
+ d3.selectAll("#add-prop-key, #add-prop-value, .property").on("keydown", function() {
+ if (d3.event.keyCode === 13) {
+ event.preventDefault();
+ }
+ return d3.select(this).classed({
+ "edited-property": true
+ });
+ });
+ return updateProperty = function(key, value, newProperty) {
+ var drawNodes, nodeID;
+ nodeID = n.id;
+ if ((key !== "") && (value !== "")) {
+ alchemy._nodes[nodeID].setProperty("" + key, "" + value);
+ drawNodes = new alchemy.drawing.DrawNodes;
+ drawNodes.updateNode(d3.select("#node-" + nodeID));
+ if (newProperty === true) {
+ d3.select("#node-add-prop-key").attr("value", "property added/updated to key: " + key);
+ return d3.select("#node-add-prop-value").attr("value", "property at " + key + " updated to: " + value);
+ } else {
+ return d3.select("#node-" + key + "-input").attr("value", "property at " + key + " updated to: " + value);
+ }
+ } else {
+ if (newProperty === true) {
+ d3.select("#node-add-prop-key").attr("value", "null or invalid input");
+ return d3.select("#node-add-prop-value").attr("value", "null or invlid input");
+ } else {
+ return d3.select("#node-" + key + "-input").attr("value", "null or invalid input");
+ }
+ }
+ };
+ };
+
+ Editor.prototype.editorClear = function() {
+ d3.selectAll(".node").classed({
+ "editing": false
+ });
+ d3.selectAll(".edge").classed({
+ "editing": false
+ });
+ d3.select("#node-editor").remove();
+ d3.select("#edge-editor").remove();
+ return d3.select("#node-add-prop-submit").attr("placeholder", function() {
+ if (d3.selectAll(".selected").empty()) {
+ return "select a node or edge to edit properties";
+ } else {
+ return "add a property to this element";
+ }
+ });
+ };
+
+ Editor.prototype.edgeEditor = function(e) {
+ var add_property, divSelector, edgeProperties, edge_property, editor, elementEditor, html, options, property, property_list, updateProperty, val;
+ divSelector = alchemy.conf.divSelector;
+ editor = d3.select("" + divSelector + " #control-dash-wrapper #control-dash #editor");
+ options = editor.select('#element-options');
+ html = this.elementEditorHTML("Edge");
+ elementEditor = options.append('div').attr('id', 'edge-editor').html(html);
+ elementEditor.attr("class", function() {
+ if (d3.select("#editor-interactions").classed("active")) {
+ return "enabled";
+ } else {
+ return "hidden";
+ }
+ });
+ add_property = editor.select("#edge-editor form #add-property");
+ add_property.select("#add-prop-key").attr("placeholder", "New Property Name").attr("value", null);
+ add_property.select("#add-prop-value").attr("placeholder", "New Property Value").attr("value", null);
+ edgeProperties = alchemy._edges[e.id].getProperties();
+ d3.select("#edge-" + e.id).classed({
+ "editing": true
+ });
+ property_list = editor.select("#edge-editor #properties-list");
+ for (property in edgeProperties) {
+ val = edgeProperties[property];
+ edge_property = property_list.append("div").attr("id", "edge-" + property).attr("class", "property form-inline form-group");
+ edge_property.append("label").attr("for", "edge-" + property + "-input").attr("class", "form-control property-name").text("" + property);
+ edge_property.append("input").attr("id", "edge-" + property + "-input").attr("class", "form-control property-value").attr("value", "" + val);
+ }
+ d3.selectAll("#add-prop-key, #add-prop-value, .property").on("keydown", function() {
+ if (d3.event.keyCode === 13) {
+ event.preventDefault();
+ }
+ return d3.select(this).classed({
+ "edited-property": true
+ });
+ });
+ d3.select("#add-property-form").on("submit", function() {
+ var key, value;
+ event.preventDefault();
+ key = d3.select("#add-prop-key").property('value');
+ key = key.replace(/\s/g, "_");
+ value = d3.select("#add-prop-value").property('value');
+ updateProperty(key, value, true);
+ d3.selectAll("#add-property .edited-property").classed({
+ "edited-property": false
+ });
+ return this.reset();
+ });
+ d3.select("#properties-list").on("submit", function() {
+ var key, properties, selection, value, _i, _len, _ref;
+ event.preventDefault();
+ properties = d3.selectAll(".edited-property");
+ _ref = properties[0];
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ property = _ref[_i];
+ selection = d3.select(property);
+ key = selection.select("label").text();
+ value = selection.select("input").property('value');
+ updateProperty(key, value, false);
+ }
+ d3.selectAll("#properties-list .edited-property").classed({
+ "edited-property": false
+ });
+ return this.reset();
+ });
+ return updateProperty = function(key, value, newProperty) {
+ var drawEdges, edgeID, edgeSelection;
+ edgeID = e.id;
+ if ((key !== "") && (value !== "")) {
+ alchemy._edges[edgeID].setProperty("" + key, "" + value);
+ edgeSelection = d3.select("#edge-" + edgeID);
+ drawEdges = new alchemy.drawing.DrawEdges;
+ drawEdges.updateEdge(d3.select("#edge-" + edgeID));
+ if (newProperty === true) {
+ d3.select("#add-prop-key").attr("value", "property added/updated to key: " + key);
+ return d3.select("#add-prop-value").attr("value", "property at " + key + " updated to: " + value);
+ } else {
+ return d3.select("#edge-" + key + "-input").attr("value", "property at " + key + " updated to: " + value);
+ }
+ } else {
+ if (newProperty === true) {
+ d3.select("#add-prop-key").attr("value", "null or invalid input");
+ return d3.select("#add-prop-value").attr("value", "null or invlid input");
+ } else {
+ return d3.select("#edge-" + key + "-input").attr("value", "null or invalid input");
+ }
+ }
+ };
+ };
+
+ return Editor;
+
+ })();
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.editor.Interactions = (function() {
+ function Interactions() {
+ this.reset = __bind(this.reset, this);
+ this.deleteSelected = __bind(this.deleteSelected, this);
+ this.addNodeDragended = __bind(this.addNodeDragended, this);
+ this.addNodeDragging = __bind(this.addNodeDragging, this);
+ this.addNodeStart = __bind(this.addNodeStart, this);
+ this.edgeClick = __bind(this.edgeClick, this);
+ this.nodeClick = __bind(this.nodeClick, this);
+ this.nodeMouseUp = __bind(this.nodeMouseUp, this);
+ this.editor = new alchemy.editor.Editor;
+ }
+
+ Interactions.prototype.nodeMouseOver = function(n) {
+ var radius;
+ if (!d3.select(this).select("circle").empty()) {
+ radius = d3.select(this).select("circle").attr("r");
+ d3.select(this).select("circle").attr("r", radius * 3);
+ }
+ return this;
+ };
+
+ Interactions.prototype.nodeMouseUp = function(n) {
+ if (this.sourceNode !== n) {
+ this.mouseUpNode = true;
+ this.targetNode = n;
+ this.click = false;
+ } else {
+ this.click = true;
+ }
+ return this;
+ };
+
+ Interactions.prototype.nodeMouseOut = function(n) {
+ var radius;
+ if (!d3.select(this).select("circle").empty()) {
+ radius = d3.select(this).select("circle").attr("r");
+ d3.select(this).select("circle").attr("r", radius / 3);
+ }
+ return this;
+ };
+
+ Interactions.prototype.nodeClick = function(c) {
+ var selected;
+ d3.event.stopPropagation();
+ if (!alchemy.vis.select("#node-" + c.id).empty()) {
+ selected = alchemy.vis.select("#node-" + c.id).classed('selected');
+ alchemy.vis.select("#node-" + c.id).classed('selected', !selected);
+ }
+ this.editor.editorClear();
+ return this.editor.nodeEditor(c);
+ };
+
+ Interactions.prototype.edgeClick = function(e) {
+ d3.event.stopPropagation();
+ this.editor.editorClear();
+ return this.editor.edgeEditor(e);
+ };
+
+ Interactions.prototype.addNodeStart = function(d, i) {
+ d3.event.sourceEvent.stopPropagation();
+ this.sourceNode = d;
+ d3.select('#dragline').classed({
+ "hidden": false
+ });
+ return this;
+ };
+
+ Interactions.prototype.addNodeDragging = function(d, i) {
+ var x2coord, y2coord;
+ x2coord = d3.event.x;
+ y2coord = d3.event.y;
+ d3.select('#dragline').attr("x1", this.sourceNode.x).attr("y1", this.sourceNode.y).attr("x2", x2coord).attr("y2", y2coord).attr("style", "stroke: #FFF");
+ return this;
+ };
+
+ Interactions.prototype.addNodeDragended = function(d, i) {
+ var dragline, targetX, targetY;
+ if (!this.click) {
+ if (!this.mouseUpNode) {
+ dragline = d3.select("#dragline");
+ targetX = dragline.attr("x2");
+ targetY = dragline.attr("y2");
+ this.targetNode = {
+ id: "" + (_.uniqueId('addedNode_')),
+ x: parseFloat(targetX),
+ y: parseFloat(targetY),
+ caption: "node added"
+ };
+ }
+ this.newEdge = {
+ id: "" + this.sourceNode.id + "-" + this.targetNode.id,
+ source: this.sourceNode.id,
+ target: this.targetNode.id,
+ caption: "edited"
+ };
+ alchemy.editor.update(this.targetNode, this.newEdge);
+ }
+ this.reset();
+ return this;
+ };
+
+ Interactions.prototype.deleteSelected = function(d) {
+ switch (d3.event.keyCode) {
+ case 8:
+ case 46:
+ if (!(d3.select(d3.event.target).node().tagName === ("INPUT" || "TEXTAREA"))) {
+ d3.event.preventDefault();
+ return alchemy.editor.remove();
+ }
+ }
+ };
+
+ Interactions.prototype.reset = function() {
+ this.mouseUpNode = null;
+ this.sourceNode = null;
+ this.targetNode = null;
+ this.newEdge = null;
+ this.click = null;
+ d3.select("#dragline").classed({
+ "hidden": true
+ }).attr("x1", 0).attr("y1", 0).attr("x2", 0).attr("y2", 0);
+ return this;
+ };
+
+ Interactions;
+
+ return Interactions;
+
+ })();
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.editor.Utils = (function() {
+ function Utils() {
+ this.enableEditor = __bind(this.enableEditor, this);
+ this.drawNodes = new alchemy.drawing.DrawNodes;
+ this.drawEdges = new alchemy.drawing.DrawEdges;
+ }
+
+ Utils.prototype.enableEditor = function() {
+ var dragLine, editor, selectedElements;
+ alchemy.setState("interactions", "editor");
+ dragLine = alchemy.vis.append("line").attr("id", "dragline");
+ this.drawNodes.updateNode(alchemy.node);
+ this.drawEdges.updateEdge(alchemy.edge);
+ selectedElements = d3.selectAll(".selected");
+ editor = new alchemy.editor.Editor;
+ if ((!selectedElements.empty()) && (selectedElements.length === 1)) {
+ if (selectedElements.classed('node')) {
+ editor.nodeEditor(selectedElements.datum());
+ return d3.select("#node-editor").attr("class", "enabled").style("opacity", 1);
+ } else if (selectedElements.classed('edge')) {
+ editor.edgeEditor(selectedElements.datum());
+ return d3.select("#edge-editor").attr("class", "enabled").style("opacity", 1);
+ }
+ } else {
+ return selectedElements.classed({
+ "selected": false
+ });
+ }
+ };
+
+ Utils.prototype.disableEditor = function() {
+ alchemy.setState("interactions", "default");
+ alchemy.vis.select("#dragline").remove();
+ d3.select("#node-editor").transition().duration(300).style("opacity", 0);
+ d3.select("#node-editor").transition().delay(300).attr("class", "hidden");
+ this.drawNodes.updateNode(alchemy.node);
+ return d3.selectAll(".node").classed({
+ "selected": false
+ });
+ };
+
+ Utils.prototype.remove = function() {
+ var edge, node, nodeID, node_data, selectedNodes, _i, _j, _len, _len1, _ref, _ref1, _results;
+ selectedNodes = d3.selectAll(".selected.node");
+ _ref = selectedNodes[0];
+ _results = [];
+ for (_i = 0, _len = _ref.length; _i < _len; _i++) {
+ node = _ref[_i];
+ nodeID = d3.select(node).data()[0].id;
+ node_data = alchemy._nodes[nodeID];
+ if (node_data != null) {
+ _ref1 = node_data.adjacentEdges;
+ for (_j = 0, _len1 = _ref1.length; _j < _len1; _j++) {
+ edge = _ref1[_j];
+ alchemy._edges = _.omit(alchemy._edges, "" + edge);
+ alchemy.edge = alchemy.edge.data(_.map(alchemy._edges, function(e) {
+ return e._d3;
+ }), function(e) {
+ return e.id;
+ });
+ d3.select("#edge-" + edge).remove();
+ }
+ alchemy._nodes = _.omit(alchemy._nodes, "" + nodeID);
+ alchemy.node = alchemy.node.data(_.map(alchemy._nodes, function(n) {
+ return n._d3;
+ }), function(n) {
+ return n.id;
+ });
+ d3.select(node).remove();
+ if (alchemy.getState("interactions") === "editor") {
+ _results.push(alchemy.modifyElements.nodeEditorClear());
+ } else {
+ _results.push(void 0);
+ }
+ } else {
+ _results.push(void 0);
+ }
+ }
+ return _results;
+ };
+
+ Utils.prototype.addNode = function(node) {
+ var newNode;
+ newNode = alchemy._nodes[node.id] = new alchemy.models.Node({
+ id: "" + node.id
+ });
+ newNode.setProperty("caption", node.caption);
+ newNode.setD3Property("x", node.x);
+ newNode.setD3Property("y", node.y);
+ return alchemy.node = alchemy.node.data(_.map(alchemy._nodes, function(n) {
+ return n._d3;
+ }), function(n) {
+ return n.id;
+ });
+ };
+
+ Utils.prototype.addEdge = function(edge) {
+ var newEdge;
+ newEdge = alchemy._edges[edge.id] = new alchemy.models.Edge(edge);
+ return alchemy.edge = alchemy.edge.data(_.map(alchemy._edges, function(e) {
+ return e._d3;
+ }), function(e) {
+ return e.id;
+ });
+ };
+
+ Utils.prototype.update = function(node, edge) {
+ if (!this.mouseUpNode) {
+ alchemy.editor.addNode(node);
+ alchemy.editor.addEdge(edge);
+ this.drawEdges.createEdge(alchemy.edge);
+ this.drawNodes.createNode(alchemy.node);
+ } else {
+ alchemy.editor.addEdge(edge);
+ this.drawEdges.createEdge(alchemy.edge);
+ }
+ return alchemy.layout.tick();
+ };
+
+ return Utils;
+
+ })();
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.models.Edge = (function() {
+ function Edge(edge) {
+ this.allNodesActive = __bind(this.allNodesActive, this);
+ this.getProperties = __bind(this.getProperties, this);
+ this.setD3Property = __bind(this.setD3Property, this);
+ this.setProperty = __bind(this.setProperty, this);
+ this.toPublic = __bind(this.toPublic, this);
+ var caption, conf;
+ conf = alchemy.conf;
+ this.id = edge.id != null ? edge.id : "" + edge.source + "-" + edge.target;
+ this.edgeStyle = _.merge(conf.edgeStyle, this.edgeStyle);
+ this.state = {
+ 'active': true
+ };
+ this.properties = edge;
+ this._edgeAttributes = new alchemy.models.EdgeAttributes;
+ caption = this._edgeAttributes.edgeCaption(this.properties);
+ if (caption) {
+ this.properties.caption = caption;
+ }
+ this._d3 = {
+ 'id': this.id,
+ 'source': alchemy._nodes[this.properties.source]._d3,
+ 'target': alchemy._nodes[this.properties.target]._d3,
+ 'caption': caption
+ };
+ alchemy._nodes["" + edge.source].addEdge(this.id);
+ alchemy._nodes["" + edge.target].addEdge(this.id);
+ }
+
+ Edge.prototype.toPublic = function() {
+ var keys;
+ keys = _.keys(this.properties);
+ return _.pick(this, keys);
+ };
+
+ Edge.prototype.setProperty = function(property, value) {
+ this.properties[property] = value;
+ if ((property === 'source') || (property === 'target')) {
+ return this.setD3Property(property, alchemy._nodes[value]._d3);
+ }
+ };
+
+ Edge.prototype.setD3Property = function(property, value) {
+ return this._d3[property] = value;
+ };
+
+ Edge.prototype.getProperties = function() {
+ return this.properties;
+ };
+
+ Edge.prototype.allNodesActive = function() {
+ var source, target;
+ source = d3.select("#node-" + this.properties.source);
+ target = d3.select("#node-" + this.properties.target);
+ return !source.classed("inactive") && !target.classed("inactive");
+ };
+
+ return Edge;
+
+ })();
+
+}).call(this);
+
+(function() {
+ alchemy.models.EdgeAttributes = (function() {
+ function EdgeAttributes() {
+ var caption, conf;
+ conf = alchemy.conf;
+ caption = conf.edgeCaption;
+ if (typeof caption === ('string' || 'number')) {
+ this.edgeCaption = function(edge) {
+ return edge[caption];
+ };
+ } else if (typeof caption === 'function') {
+ this.edgeCaption = function(edge) {
+ return caption(edge);
+ };
+ }
+ }
+
+ return EdgeAttributes;
+
+ })();
+
+}).call(this);
+
+
+/*
+leave in drawing.drawingUtils for now...
+We are tied to d3 methods so it does not makes sense to abstract out into a model
+ */
+
+(function() {
+
+
+}).call(this);
+
+(function() {
+ var __bind = function(fn, me){ return function(){ return fn.apply(me, arguments); }; };
+
+ alchemy.models.Node = (function() {
+ function Node(node) {
+ this.removeProperty = __bind(this.removeProperty, this);
+ this.setD3Property = __bind(this.setD3Property, this);
+ this.setProperty = __bind(this.setProperty, this);
+ this.getProperties = __bind(this.getProperties, this);
+ var conf, nodeAttr, radius;
+ conf = alchemy.conf;
+ nodeAttr = new alchemy.models.NodeAttributes;
+ radius = nodeAttr.nodeSize(node);
+ this.id = node.id;
+ this.properties = node;
+ this.state = {
+ "active": true
+ };
+ this._d3 = {
+ 'id': node.id,
+ 'r': radius,
+ 'stroke-width': nodeAttr.strokeWidth(radius),
+ 'root': this.properties[conf.rootNodes]
+ };
+ this.nodeStyle = _.merge(conf.nodeStyle, this.nodeStyle);
+ this.adjacentEdges = [];
+ Node.prototype.all.push(this.id);
+ if (conf.nodeTypes) {
+ this.nodeType = this.properties[Object.keys(alchemy.conf.nodeTypes)];
+ if (this.nodeType) {
+ this._d3['nodeType'] = this.nodeType;
+ }
+ }
+ }
+
+ Node.prototype.addEdge = function(edge) {
+ this.adjacentEdges.push(edge);
+ return this.adjacentEdges = _.uniq(this.adjacentEdges);
+ };
+
+ Node.prototype.outDegree = function() {
+ return this.adjacentEdges.length;
+ };
+
+ Node.prototype.neighbors = function() {
+ var regex;
+ regex = new RegExp("[(" + this.id + '\\' + "-)(" + '\\' + "-" + this.id + ")]", "g");
+ return _.map(this.adjacentEdges, function(edgeID) {
+ return edgeID.replace(regex, "");
+ });
+ };
+
+ Node.prototype.getProperties = function() {
+ return this.properties;
+ };
+
+ Node.prototype.setProperty = function(property, value) {
+ return this.properties[property] = value;
+ };
+
+ Node.prototype.setD3Property = function(property, value) {
+ return this._d3[property] = value;
+ };
+
+ Node.prototype.removeProperty = function(property) {
+ if (this.properties.property != null) {
+ return _.omit(this.properties, property);
+ }
+ };
+
+ Node.prototype.all = [];
+
+ return Node;
+
+ })();
+
+}).call(this);
+
+(function() {
+ alchemy.models.NodeAttributes = (function() {
+ function NodeAttributes() {
+ var rootKey;
+ rootKey = alchemy.conf.rootNodes;
+ if (typeof alchemy.conf.nodeRadius === 'function') {
+ this.nodeSize = function(node) {
+ if ((node[rootKey] != null) && d[rootKey]) {
+ return alchemy.conf.rootNodeRadius(node);
+ } else {
+ return alchemy.conf.nodeRadius(node);
+ }
+ };
+ } else if (typeof alchemy.conf.nodeRadius === 'string') {
+ this.nodeSize = function(node) {
+ var key;
+ key = alchemy.conf.nodeRadius;
+ if (node[rootKey] != null) {
+ return alchemy.conf.rootNodeRadius;
+ } else if (node[key] != null) {
+ return node[key];
+ } else {
+ return alchemy.defaults.rootNodeRadius;
+ }
+ };
+ } else if (typeof alchemy.conf.nodeRadius === 'number') {
+ this.nodeSize = function(node) {
+ if (node[rootKey] != null) {
+ return alchemy.conf.rootNodeRadius;
+ } else {
+ return alchemy.conf.nodeRadius;
+ }
+ };
+ }
+ }
+
+ NodeAttributes.prototype.strokeWidth = function(radius) {
+ return radius / 3;
+ };
+
+ return NodeAttributes;
+
+ })();
+
+}).call(this);
+
+(function() {
+ alchemy.utils.warnings = {
+ dataWarning: function() {
+ var no_results;
+ if (alchemy.conf.dataWarning && typeof alchemy.conf.dataWarning === 'function') {
+ return alchemy.conf.dataWarning();
+ } else if (alchemy.conf.dataWarning === 'default') {
+ no_results = "\n
\n
\n \n
\n
" + alchemy.conf.warningMessage + "
\n
\n \n
\n
\n
";
+ $('body').append(no_results);
+ $('#no-results').modal('show');
+ $('#loading-spinner').hide();
+ }
+ },
+ divWarning: function() {
+ return "create an element that matches the value for 'divSelector' in your conf.\nFor instance, if you are using the default 'divSelector' conf, simply provide\n.";
+ }
+ };
+
+}).call(this);
diff --git a/dist/alchemy.min.css b/dist/alchemy.min.css
new file mode 100644
index 0000000..fdc8f05
--- /dev/null
+++ b/dist/alchemy.min.css
@@ -0,0 +1 @@
+@-webkit-keyframes fadeIn{0%{opacity:0}25%{opacity:.3}50%{opacity:.66}75%{opacity:1}}@keyframes fadeIn{0%{opacity:0}25%{opacity:.3}50%{opacity:.66}75%{opacity:1}}@-webkit-keyframes pulse{0%{text-shadow:0 0 10px rgba(255,255,255,.2),0 0 12px rgba(255,255,255,.2),0 0 16px rgba(255,255,255,.2)}25%{text-shadow:0 0 12px rgba(255,255,255,.2),0 0 15px rgba(255,255,255,.2),0 0 20px rgba(255,255,255,.2),0 0 6px rgba(104,185,254,.7),0 0 10px rgba(104,185,254,.7)}50%{text-shadow:0 0 12px rgba(255,255,255,.2),0 0 15px rgba(255,255,255,.2),0 0 20px rgba(255,255,255,.2),0 0 8px rgba(104,185,254,.7),0 0 10px rgba(104,185,254,.7),0 0 15px rgba(104,185,254,.7)}75%{text-shadow:0 0 12px rgba(255,255,255,.2),0 0 15px rgba(255,255,255,.2),0 0 25px rgba(255,255,255,.2),0 0 8px rgba(104,185,254,.7),0 0 12px rgba(104,185,254,.7),0 0 15px rgba(104,185,254,.7),0 0 20px rgba(104,185,254,.7)}}@keyframes pulse{0%{text-shadow:0 0 10px rgba(255,255,255,.2),0 0 12px rgba(255,255,255,.2),0 0 16px rgba(255,255,255,.2)}25%{text-shadow:0 0 12px rgba(255,255,255,.2),0 0 15px rgba(255,255,255,.2),0 0 20px rgba(255,255,255,.2),0 0 6px rgba(104,185,254,.7),0 0 10px rgba(104,185,254,.7)}50%{text-shadow:0 0 12px rgba(255,255,255,.2),0 0 15px rgba(255,255,255,.2),0 0 20px rgba(255,255,255,.2),0 0 8px rgba(104,185,254,.7),0 0 10px rgba(104,185,254,.7),0 0 15px rgba(104,185,254,.7)}75%{text-shadow:0 0 12px rgba(255,255,255,.2),0 0 15px rgba(255,255,255,.2),0 0 25px rgba(255,255,255,.2),0 0 8px rgba(104,185,254,.7),0 0 12px rgba(104,185,254,.7),0 0 15px rgba(104,185,254,.7),0 0 20px rgba(104,185,254,.7)}}@-webkit-keyframes slide-in{0%{-webkit-transform:translate(-100%,0);transform:translate(-100%,0)}100%{-webkit-transform:translate(0%,0);transform:translate(0%,0)}}@keyframes slide-in{0%{-webkit-transform:translate(-100%,0);transform:translate(-100%,0)}100%{-webkit-transform:translate(0%,0);transform:translate(0%,0)}}@-webkit-keyframes slide-out{0%{-webkit-transform:translate(0%,0);transform:translate(0%,0)}100%{-webkit-transform:translate(-100%,0);transform:translate(-100%,0)}}@keyframes slide-out{100%{-webkit-transform:translate(-100%,0);transform:translate(-100%,0)}}svg{background:#000;position:absolute;left:0;cursor:-webkit-grab;height:100%;width:100%;color:#333}.node{cursor:pointer}.node circle{fill:#68b9fe;fill-opacity:.8;stroke:#127dc1;stroke-opacity:1}.node circle.root{fill:#9000ff;stroke:#90c73d}.node text.root{font-size:32px}.node text{display:none;fill:#fff;font-weight:200;text-anchor:middle;z-index:1000;text-shadow:1px 1px #333,-1px 1px #333,1px -1px #333,-1px -1px #333}.node.active{opacity:1;fill:#fff}.node.active.highlight{opacity:.8!important}.node.active.highlight circle{fill-opacity:1;stroke:#015399;stroke-width:3px;fill:#fff}.node.active.selected circle{stroke-width:5px;fill-opacity:.8;stroke-opacity:1;stroke:#fff;fill:#68b9fe}.node.active.selected text{display:block}.node.active.selected:hover circle{stroke-width:5px;fill-opacity:.8;stroke-opacity:1;stroke:#fff;fill:#fff}.node.active:hover circle{stroke-width:3px;fill-opacity:.8;stroke-opacity:1;stroke:#015399;fill:#9bd0fe}.node.active:hover text{display:block}.node.inactive{opacity:0}.node.inactive.highlight{opacity:.8!important}.node.inactive.highlight circle{fill-opacity:1;stroke:#e89619;stroke-width:2px;fill:#fff}defs #arrow path{stroke:#CCC;stroke-opacity:.2;fill:#CCC;opacity:1}.edge{stroke-width:2;stroke:#ccc;stroke-opacity:.2}.edge text{stroke-width:0}.edge .edge-handler{fill:none;stroke:none}.edge .edge-line{fill:none}.edge.active{opacity:1}.edge.active text{display:none;fill:#fff;font-weight:200;text-anchor:middle;z-index:1000}.edge.active.selected,.edge.active:hover{cursor:pointer}.edge.active.selected .edge-line,.edge.active:hover .edge-line{stroke:#fff!important;stroke-opacity:1;stroke-width:4}.edge.active.selected text,.edge.active:hover text{display:block}.edge.active.highlight{opacity:.8!important;stroke-width:2;stroke:#fff!important;stroke-opacity:1}.edge.active.highlight text{display:block}.edge.inactive{display:none;opacity:0}.edge.inactive.highlight{opacity:.8!important;stroke-width:2;stroke-opacity:.5;stroke:#e89619}#loading-spinner{position:absolute;right:0}#zoom-controls{background-color:transparent;background-image:url(images/maze-black.png);border-top-right-radius:3px;border-bottom-right-radius:3px;box-shadow:0 0 5px rgba(255,255,255,.3);margin-top:10%;z-index:5;position:relative;display:block;width:55px}#zoom-controls #zoom-in,#zoom-controls #zoom-out,#zoom-controls #zoom-reset{padding:12px;margin:0;width:100%}#zoom-controls #zoom-in i,#zoom-controls #zoom-out i,#zoom-controls #zoom-reset i{color:#E89619}#zoom-controls #zoom-in:hover,#zoom-controls #zoom-out:hover,#zoom-controls #zoom-reset:hover{background-color:rgba(255,255,255,.2)}#zoom-controls #zoom-in:active,#zoom-controls #zoom-out:active,#zoom-controls #zoom-reset:active{border:0}.fa-caret-down,.fa-caret-right,.fa-search{margin:0 5px;color:#e89619}#search{margin-top:2em;margin-bottom:1em;padding:.5em 1em;width:100%}#search span{vertical-align:bottom}#search input{background-color:#000;border:0;font-size:20px;color:#fff;padding-left:.5em}#search .search-icon{height:22px;background-color:#000;border-color:#000;border-right-color:#111}#stats{padding:.5em 1em;background-color:transparent;border-bottom:thin dashed #e89619}#stats #stats-header{padding:10px}#stats #all-stats{color:#fff;border-radius:none;border:0;background:0 0;overflow:auto}#stats #all-stats li{padding:3px}#stats #edge-stats-graph,#stats #node-stats-graph{height:250px}#stats #edge-stats-graph svg,#stats #node-stats-graph svg{opacity:.6;background:0 0}#stats #edge-stats-graph text,#stats #node-stats-graph text{font-size:16px;fill:#fff;font-weight:200;text-anchor:middle;z-index:1000}#stats #edge-stats-graph .no-data,#stats #node-stats-graph .no-data{margin:30px 0;color:#e89619}#stats .badge{border-radius:0;height:100%;background-color:rgba(104,185,254,.6)}#editor{padding:.5em 1em;background-color:transparent;border-bottom:thin dashed #e89619}#editor h3{padding:10px}#editor #element-options{display:-webkit-flex;display:flex;-webkit-flex-direction:column;flex-direction:column;cursor:pointer;margin-top:10px;margin-left:2%;color:#fff}#editor #element-options #add-property-form,#editor #element-options .property{display:-webkit-inline-flex;display:inline-flex;margin:4px 0;width:100%}#editor #element-options #add-property-form #add-property #add-prop-value,#editor #element-options .property-value{border:thin rgba(255,255,255,.2) solid;border-left:0;background-color:#000;color:#fff;width:100%;border-top-left-radius:0;border-bottom-left-radius:0}#editor #element-options #add-property-form #add-property #add-prop-key,#editor #element-options .property-name{text-align:center;font-weight:200;cursor:default;background:#2E2E2E;border:thin transparent solid;color:#e89619;border-right:0;border-top-right-radius:0;border-bottom-right-radius:0}#editor #element-options #update-properties,#editor #element-options input[type=submit]{color:#e89619;border-top-right-radius:4px;border-bottom-right-radius:4px;width:auto;background:rgba(255,255,255,.1);border:thin solid #e89619;text-align:center}#editor #element-options #update-properties:active,#editor #element-options #update-properties:focus,#editor #element-options input[type=submit]:active,#editor #element-options input[type=submit]:focus{outline:0}#editor #element-options #update-properties:hover,#editor #element-options input[type=submit]:hover{color:#fff;border:thin solid #fff}#editor #element-options #update-properties{border-radius:4px;padding:10px;width:100%;margin-bottom:20px}#editor #element-options #add-property-form #add-property{display:-webkit-flex;display:flex;-webkit-flex-grow:2;flex-grow:2;-webkit-flex-direction:column;flex-direction:column}#editor #element-options #add-property-form #add-property #add-prop-value{text-align:center;width:100%;border-top-right-radius:0;border-bottom-right-radius:0;border-bottom-left-radius:4px;border:thin rgba(255,255,255,.2) solid}#editor #element-options #add-property-form #add-property #add-prop-key{cursor:text;width:100%;border-top-left-radius:4px;border-bottom-left-radius:0}#editor #editor-interactions.active{color:#e89619}#editor #editor-interactions.inactive{color:#fff}#editor #edge-editor.enabled,#editor #node-editor.enabled{-webkit-animation:fadeIn 1s linear;animation:fadeIn 1s linear}#control-dash-wrapper{font-family:'Source Sans Pro',Helvetica,sans-serif;letter-spacing:.05em;height:inherit;z-index:inherit;padding:0}#control-dash-wrapper.initial{-webkit-transform:translate(-100%,0);transform:translate(-100%,0)}#control-dash-wrapper.initial #dash-toggle{color:#e89619;-webkit-animation:4s pulse linear;animation:4s pulse linear}#control-dash-wrapper.off-canvas{-webkit-transform:translate(-100%,0);transform:translate(-100%,0);-webkit-animation:slide-out .75s linear;animation:slide-out .75s linear}#control-dash-wrapper.off-canvas #dash-toggle{color:#e89619;-webkit-animation:4s pulse linear;animation:4s pulse linear}#control-dash-wrapper.on-canvas{-webkit-animation:slide-in .75s ease-in-out;animation:slide-in .75s ease-in-out}#control-dash-wrapper.on-canvas *{box-shadow:none!important}#control-dash-wrapper.on-canvas #dash-toggle{color:rgba(232,150,25,.6)}#control-dash-wrapper.on-canvas #dash-toggle:hover{color:#e89619;-webkit-animation:4s pulse linear;animation:4s pulse linear}#control-dash-wrapper #control-dash{overflow-x:hidden;overflow-y:scroll;background-color:transparent;background-image:url(images/maze-black.png);padding:0;height:inherit;z-index:5}#control-dash-wrapper #control-dash h3{display:inline;margin:0}#control-dash-wrapper #dash-toggle{z-index:5;background-color:transparent;background-image:url(images/maze-black.png);border-top-right-radius:3px;border-bottom-right-radius:3px;box-shadow:0 0 5px rgba(255,255,255,.3);position:absolute;left:0;top:50%;font-size:2.2em;color:rgba(255,255,255,.2);padding:10px}#control-dash-wrapper button{border-radius:0;border:0;background-color:transparent}#control-dash-wrapper button:active{border:0}#control-dash-wrapper h3{font-weight:200;margin-top:10px;color:#fff;cursor:pointer;vertical-align:top}#control-dash-wrapper li{cursor:pointer;background:0 0;border:0;border-radius:0}#filters{padding:.5em 1em;background-color:transparent;border-bottom:thin dashed #e89619;color:#fff}#filters form{width:100%}#filters #filter-header{padding:10px}#filters #filter-nodes,#filters #filter-relationships{background-color:transparent;display:inline-block;width:45%;margin-left:2%;overflow:auto;text-align:center;vertical-align:top}#filters #filter-nodes #filter-node-header,#filters #filter-nodes #filter-rel-header,#filters #filter-relationships #filter-node-header,#filters #filter-relationships #filter-rel-header{margin:10px 0;cursor:pointer;background-color:transparent;border:0;border-radius:0;width:100%}#filters #filter-nodes #filter-node-header h4,#filters #filter-nodes #filter-rel-header h4,#filters #filter-relationships #filter-node-header h4,#filters #filter-relationships #filter-rel-header h4{font-weight:200;display:inline;color:#fff}#filters #filter-nodes #filter-node-header:active,#filters #filter-nodes #filter-rel-header:active,#filters #filter-relationships #filter-node-header:active,#filters #filter-relationships #filter-rel-header:active{border:0;box-shadow:none}#filters #filter-nodes #node-dropdown,#filters #filter-nodes #rel-dropdown,#filters #filter-relationships #node-dropdown,#filters #filter-relationships #rel-dropdown{margin:20px 0;border-radius:none;border:0;background:0 0}#filters #filter-nodes #node-dropdown li,#filters #filter-nodes #rel-dropdown li,#filters #filter-relationships #node-dropdown li,#filters #filter-relationships #rel-dropdown li{padding:5px}#filters #filter-nodes #node-dropdown li:hover,#filters #filter-nodes #rel-dropdown li:hover,#filters #filter-relationships #node-dropdown li:hover,#filters #filter-relationships #rel-dropdown li:hover{background-color:rgba(255,255,255,.2)}#filters .disabled{color:rgba(255,255,255,.5)}#filters .disabled:hover{color:#fdc670}.alchemy{position:relative}.alchemy #search form{z-index:2;display:inline;margin-left:100px}.alchemy #add-tag{width:300px;display:inline-block}.alchemy #tags input{max-width:220px}.alchemy #tags-list{padding:0}.alchemy #tags-list .icon-remove-sign{cursor:pointer}.alchemy #tags-list li{display:inline-block;margin-top:5px}.alchemy #tags-list span{background-color:#ccc;color:#333;border-radius:10em;display:inline-block;padding:1px 6px}.alchemy #filter-nodes label,.alchemy #filter-relationships label{font-weight:400;margin-right:1em}.alchemy .clear{clear:both}.alchemy text{font-weight:200;text-anchor:middle}
\ No newline at end of file
diff --git a/dist/alchemy.min.js b/dist/alchemy.min.js
new file mode 100644
index 0000000..52ea9c3
--- /dev/null
+++ b/dist/alchemy.min.js
@@ -0,0 +1,2 @@
+(function(){"Alchemy.js is a graph drawing application for the web.\nCopyright (C) 2014 GraphAlchemist, Inc.\n\nThis program is free software: you can redistribute it and/or modify\nit under the terms of the GNU Affero General Public License as published by\nthe Free Software Foundation, either version 3 of the License, or\n(at your option) any later version.\n\nThis program is distributed in the hope that it will be useful,\nbut WITHOUT ANY WARRANTY; without even the implied warranty of\nMERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\nGNU Affero General Public License for more details.\n\nYou should have received a copy of the GNU Affero General Public License\nalong with this program. If not, see .\nlets";var a,b,c=function(a,b){return function(){return a.apply(b,arguments)}},d=[].slice;a=function(){function a(){this.allEdges=c(this.allEdges,this),this.allNodes=c(this.allNodes,this),this.getEdges=c(this.getEdges,this),this.getNodes=c(this.getNodes,this),this.begin=c(this.begin,this),this.setState=c(this.setState,this),this.getState=c(this.getState,this),this.version="0.2.0",this.layout={},this.interactions={},this.utils={},this.visControls={},this.styles={},this.models={},this.drawing={},this.editor={},this.log={},this.state={interactions:"default",layout:"default",filters:{edges:{},nodes:{}}}}return a.prototype.getState=function(){return null!=this.state.key?this.state.key:void 0},a.prototype.setState=function(a,b){return this.state.key=b},a.prototype.begin=function(a){return this.conf=_.assign({},alchemy.defaults,a),"string"==typeof alchemy.conf.dataSource?d3.json(alchemy.conf.dataSource,alchemy.startGraph):"object"==typeof alchemy.conf.dataSource?alchemy.startGraph(alchemy.conf.dataSource):void 0},a.prototype.getNodes=function(){var a,b,c,e,f,g,h;if(a=arguments[0],b=2<=arguments.length?d.call(arguments,1):[]){for(b.push(a),e=_.union(b),f=[],g=0,h=e.length;h>g;g++)c=e[g],f.push(alchemy._nodes[c].properties);return f}return[this._nodes[a].properties]},a.prototype.getEdges=function(a,b){var c,d,e;return null==a&&(a=null),null==b&&(b=null),null!=a&&null!=b?(d=""+a+"-"+b,c=this._edges[d],[c.properties]):null!=a&&null==b?(e=_.map(this._edges,function(b){return b.properties.source===a||b.properties.target===a?b.properties:void 0}),_.compact(e)):void 0},a.prototype.allNodes=function(){return _.map(this._nodes,function(a){return a.properties})},a.prototype.allEdges=function(){return _.map(this._edges,function(a){return a.properties})},a}(),b={},"undefined"!=typeof module&&module.exports?module.exports=new a:this.alchemy=new a}).call(this),function(){alchemy.clustering=function(){function a(){var a,b,c,d,e,f;a=alchemy._nodes,this.clusterKey=alchemy.conf.clusterKey,this.identifyClusters(),b=-500,f=function(b){return a[b.source.id].properties[this.clusterKey]===a[b.target.id].properties[this.clusterKey]?1:1},c=function(){return.7},e=function(b){return a=alchemy._nodes,a[b.source.id].properties.root||a[b.target.id].properties.root?300:a[b.source.id].properties[this.clusterKey]===a[b.target.id].properties[this.clusterKey]?10:600},d=function(a){return 8*a},this.layout={charge:b,linkStrength:function(a){return f(a)},friction:function(){return c()},linkDistancefn:function(a){return e(a)},gravity:function(a){return d(a)}}}return a.prototype.identifyClusters=function(){var a,b,c;return b=alchemy._nodes,a=_.uniq(_.map(_.values(b),function(a){return a.properties[""+alchemy.conf.clusterKey]})),this.clusterMap=_.zipObject(a,function(){c=[];for(var b=0,d=a.length;d>=0?d>=b:b>=d;d>=0?b++:b--)c.push(b);return c}.apply(this))},a.prototype.getClusterColour=function(a){var b;return b=this.clusterMap[a]%alchemy.conf.clusterColours.length,alchemy.conf.clusterColours[b]},a.prototype.edgeGradient=function(a){var b,c,d,e,f,g,h,i,j,k,l,m,n,o;for(c=d3.select(""+alchemy.conf.divSelector+" svg"),b={},j=alchemy._nodes,n=_.map(a,function(a){return a._d3}),l=0,m=n.length;m>l;l++)if(d=n[l],!j[d.source.id].properties.root&&!j[d.target.id].properties.root&&j[d.source.id].properties[this.clusterKey]!==j[d.target.id].properties[this.clusterKey]&&j[d.target.id].properties[this.clusterKey]!==j[d.source.id].properties[this.clusterKey]){if(h=j[d.source.id].properties[this.clusterKey]+"-"+j[d.target.id].properties[this.clusterKey],h in b)continue;h in b||(k=this.getClusterColour(j[d.target.id].properties[this.clusterKey]),e=this.getClusterColour(j[d.source.id].properties[this.clusterKey]),b[h]={startColour:k,endColour:e})}o=[];for(i in b)g="cluster-gradient-"+i,f=c.append("svg:linearGradient").attr("id",g),f.append("svg:stop").attr("offset","0%").attr("stop-color",b[i].startColour),o.push(f.append("svg:stop").attr("offset","100%").attr("stop-color",b[i].endColour));return o},a}(),alchemy.clusterControls={init:function(){var a;return a="Cluster By:
\n",d3.select("#clustering-container").append("div").attr("id","cluster-key-container").html(a).style("display","none"),d3.select("#cluster_control_header").on("click",function(){var a,b;return b=d3.select("#cluster-key-container"),a=b.style("display"),b.style("display",function(){return"block"===a?"none":"block"})}),d3.select("#cluster-key").on("keydown",function(){return"Enter"===d3.event.keyIdentifier?(alchemy.conf.cluster=!0,alchemy.conf.clusterKey=this.value,alchemy.generateLayout()):void 0})}}}.call(this),function(){alchemy.controlDash={init:function(){var a;return alchemy.conf.showControlDash===!0?(a=alchemy.conf.divSelector,d3.select(""+a).append("div").attr("id","control-dash-wrapper").attr("class","col-md-4 initial"),d3.select("#control-dash-wrapper").append("i").attr("id","dash-toggle").attr("class","fa fa-flask col-md-offset-12"),d3.select("#control-dash-wrapper").append("div").attr("id","control-dash").attr("class","col-md-12"),d3.select("#dash-toggle").on("click",alchemy.interactions.toggleControlDash),alchemy.controlDash.zoomCtrl(),alchemy.controlDash.search(),alchemy.controlDash.filters(),alchemy.controlDash.stats(),alchemy.controlDash.clustering()):void 0},search:function(){return alchemy.conf.search?(d3.select("#control-dash").append("div").attr("id","search").html("\n \n \n
"),alchemy.search.init()):void 0},zoomCtrl:function(){return alchemy.conf.zoomControls?(d3.select("#control-dash-wrapper").append("div").attr("id","zoom-controls").attr("class","col-md-offset-12").html(" "),d3.select("#zoom-in").on("click",function(){return alchemy.interactions.clickZoom("in")}),d3.select("#zoom-out").on("click",function(){return alchemy.interactions.clickZoom("out")}),d3.select("#zoom-reset").on("click",function(){return alchemy.interactions.clickZoom("reset")})):void 0},filters:function(){return alchemy.conf.showFilters?(d3.select("#control-dash").append("div").attr("id","filters"),alchemy.filters.init()):void 0},stats:function(){var a;return alchemy.conf.showStats?(a='\n',d3.select("#control-dash").append("div").attr("id","stats").html(a).select("#stats-header").on("click",function(){return d3.select("#all-stats").classed("in")?d3.select("#stats-header>span").attr("class","fa fa-2x fa-caret-right"):d3.select("#stats-header>span").attr("class","fa fa-2x fa-caret-down")}),alchemy.stats.init()):void 0},clustering:function(){var a;return alchemy.conf.clusterControl?(a='\n \n
',d3.select("#control-dash").append("div").attr("id","clustering").html(a).select("#cluster_control_header"),alchemy.clusterControls.init()):void 0}}}.call(this),function(){alchemy.filters={init:function(){var a,b,c,d,e,f,g,h,i,j,k,l,m,n,o,p;if(alchemy.filters.show(),alchemy.conf.edgeFilters&&alchemy.filters.showEdgeFilters(),alchemy.conf.nodeFilters&&alchemy.filters.showNodeFilters(),alchemy.conf.nodeTypes){for(e=Object.keys(alchemy.conf.nodeTypes),g="",n=alchemy.conf.nodeTypes[e],h=0,k=n.length;k>h;h++)f=n[h],alchemy.state.filters.nodes[""+f]={active:!0},a=f.replace("_"," "),g+=""+a+"";$("#node-dropdown").append(g)}if(alchemy.conf.edgeTypes){for(o=d3.selectAll(".edge")[0],i=0,l=o.length;l>i;i++)b=o[i],currentRelationshipTypes[[b].caption]=!0;for(d="",p=alchemy.conf.edgeTypes,j=0,m=p.length;m>j;j++)c=p[j],alchemy.state.filters.edges[""+c]={active:!0},a=c.replace("_"," "),d+=""+a+"";$("#rel-dropdown").append(d)}return alchemy.conf.captionsToggle&&alchemy.filters.captionsToggle(),alchemy.conf.edgesToggle&&alchemy.filters.edgesToggle(),alchemy.conf.nodesToggle&&alchemy.filters.nodesToggle(),alchemy.filters.update()},show:function(){var a;return a='\n ',d3.select("#control-dash #filters").html(a),d3.selectAll("#filter-header").on("click",function(){return d3.select("#filters>form").classed("in")?d3.select("#filter-header>span").attr("class","fa fa-2x fa-caret-right"):d3.select("#filter-header>span").attr("class","fa fa-2x fa-caret-down")}),$("#filters form").submit(!1)},showEdgeFilters:function(){var a;return a='\n',$("#filters form").append(a),d3.select("#filter-rel-header").on("click",function(){return d3.select("#rel-dropdown").classed("in")?d3.select("#filter-rel-header>span").attr("class","fa fa-lg fa-caret-right"):d3.select("#filter-rel-header>span").attr("class","fa fa-lg fa-caret-down")})},showNodeFilters:function(){var a;return a=' ',$("#filters form").append(a),d3.select("#filter-node-header").on("click",function(){return d3.select("#node-dropdown").classed("in")?d3.select("#filter-node-header>span").attr("class","fa fa-lg fa-caret-right"):d3.select("#filter-node-header>span").attr("class","fa fa-lg fa-caret-down")})},captionsToggle:function(){return d3.select("#filters form").append("li").attr({id:"toggle-captions","class":"list-group-item active-label toggle"}).html("Show Captions").on("click",function(){var a;return a=d3.select("g text").attr("style"),"display: block"===a?d3.selectAll("g text").attr("style","display: none"):d3.selectAll("g text").attr("style","display: block")})},edgesToggle:function(){return d3.select("#filters form").append("li").attr({id:"toggle-edges","class":"list-group-item active-label toggle"}).html("Toggle Edges").on("click",function(){return 0===d3.selectAll(".edge.hidden")[0].length?d3.selectAll(".edge").classed("hidden",!0):d3.selectAll(".edge").classed("hidden",!1)})},nodesToggle:function(){return d3.select("#filters form").append("li").attr({id:"toggle-nodes","class":"list-group-item active-label toggle"}).html("Toggle Nodes").on("click",function(){var a;return a=alchemy.conf.toggleRootNodes?".node,.edge":".node:not(.root),.edge",0===d3.selectAll(".node.hidden")[0].length?d3.selectAll(a).classed("hidden",!0):d3.selectAll(a).classed("hidden",!1)})},update:function(){var a,b;return a=function(a){var b,c,d;return d=a.attr("name"),c=!a.classed("disabled"),b=a.classed("nodeType")?"nodes":"edges",[d,b,c]},b=function(a,b,c,d){var e,f,g,h,i,j,k,l,m,n;if("object"!=typeof a){if(g=d3.selectAll("."+a),g.classed({inactive:c,highlight:d}),"nodes"===b)for(m=g.data(),i=0,k=m.length;k>i;i++)for(h=m[i],n=alchemy._nodes[h.id].adjacentEdges,j=0,l=n.length;l>j;j++)e=n[j],f=alchemy._edges[e],f.allNodesActive()||(c=!0),d3.select("[source-target='"+e+"']").classed({inactive:c,highlight:d});return"edges"===b&&g.classed({inactive:function(a){var b;return b=alchemy._edges[a.id].allNodesActive(),c||!b}}),alchemy.stats.update()}},d3.selectAll(".nodeType, .edgeType").on("mouseenter",function(){var b,c,d,e,f;return b=d3.select(this),f=a(b),e=f[0],c=f[1],d=f[2],d3.selectAll("."+e).classed("highlight",!0)}).on("mouseleave",function(){var b,c,d,e,f;return b=d3.select(this),f=a(b),e=f[0],c=f[1],d=f[2],d3.selectAll("."+e).classed("highlight",!1)}).on("click",function(){var c,d,e,f,g,h;return c=d3.select(this),h=a(c),g=h[0],d=h[1],f=h[2],e=!1,c.classed({disabled:f}),b(g,d,f,e)})}}}.call(this),function(){alchemy.interactions={edgeClick:function(a){var b;return b=alchemy.vis,b.selectAll(".edge").classed({highlight:!1}),d3.select("[source-target='"+a.id+"']").classed({highlight:!0,selected:!0}),d3.event.stopPropagation(),"function"==typeof(null!=alchemy.conf.edgeClick)?alchemy.conf.edgeClick():void 0},nodeMouseOver:function(a){var b;return null==alchemy.conf.nodeMouseOver?null:(b=alchemy._nodes[a.id],"function"==typeof alchemy.conf.nodeMouseOver?alchemy.conf.nodeMouseOver(b):"number"==typeof alchemy.conf.nodeMouseOver?b.properties[alchemy.conf.nodeMouseOver]:void 0)},nodeMouseOut:function(a){return null!=alchemy.conf.nodeMouseOut&&"function"==typeof alchemy.conf.nodeMouseOut?alchemy.conf.nodeMouseOut(a):null},nodeMouseUp:function(){},nodeDoubleClick:function(a){var b,c,d;if(d3.event.stopPropagation(),alchemy.conf.extraDataSource&&!a.expanded&&!alchemy.conf.unexpandable.indexOf(a.type===!1)){$('nner').show(),console.log("loading more data for "+a.id),a.expanded=!0,d3.json(alchemy.conf.extraDataSource+a.id,loadMoreNodes),c=findAllEdges(a),d=[];for(b in edges)d.push(edges[b].distance*=2);return d}},nodeClick:function(a){var b;d3.event.stopPropagation(),alchemy.vis.select("#node-"+a.id).empty()||(b=alchemy.vis.select("#node-"+a.id).classed("selected"),alchemy.vis.select("#node-"+a.id).classed("selected",!b)),"function"==typeof alchemy.conf.nodeClick&&alchemy.conf.nodeClick(a)},zoom:function(a){return null==this._zoomBehavior&&(this._zoomBehavior=d3.behavior.zoom()),this._zoomBehavior.scaleExtent(a).on("zoom",function(){return alchemy.vis.attr("transform","translate("+d3.event.translate+") scale("+d3.event.scale+")")})},clickZoom:function(a){var b,c,d,e;return e=alchemy.vis.attr("transform").match(/(-*\d+\.*\d*)/g).map(function(a){return parseFloat(a)}),c=e[0],d=e[1],b=e[2],alchemy.vis.attr("transform",function(){return"in"===a?(balchemy.conf.scaleExtent[0]&&(b-=.2),"translate("+c+","+d+") scale("+b+")"):"reset"===a?"translate(0,0) scale(1)":console.log("error")}),null==this._zoomBehavior&&(this._zoomBehavior=d3.behavior.zoom()),this._zoomBehavior.scale(b).translate([c,d])},toggleControlDash:function(){var a;return a=d3.select("#control-dash-wrapper").classed("off-canvas")||d3.select("#control-dash-wrapper").classed("initial"),d3.select("#control-dash-wrapper").classed({"off-canvas":!a,initial:!1,"on-canvas":a})},nodeDragStarted:function(a){return d3.event.sourceEvent.stopPropagation(),d3.select(this).classed("dragging",!0),a.fixed=!0},nodeDragged:function(a){var b,c,d,e,f,g,h,i;for(a.x+=d3.event.dx,a.y+=d3.event.dy,a.px+=d3.event.dx,a.py+=d3.event.dy,e=d3.select(this),e.attr("transform","translate("+a.x+", "+a.y+")"),c=alchemy._nodes[e.datum().id].adjacentEdges,b=new alchemy.drawing.DrawEdges,i=[],g=0,h=c.length;h>g;g++)d=c[g],f=d3.select("g.edge[source-target='"+d+"']"),i.push(b.updateEdge(f));return i},nodeDragended:function(){return d3.select(this).classed({dragging:!1}),alchemy.conf.forceLocked?void 0:alchemy.force.start()},deselectAll:function(){var a;if(null!=(a=d3.event)?!a.defaultPrevented:!0)return alchemy.vis.selectAll(".node, .edge").classed("selected highlight",!1),d3.select(".alchemy svg").classed({"highlight-active":!1}),alchemy.conf.showEditor===!0&&alchemy.modifyElements.nodeEditorClear(),alchemy.vis.selectAll("line.edge").classed("highlighted connected unconnected",!1),alchemy.vis.selectAll("g.node,circle,text").classed("selected unselected neighbor unconnected connecting",!1),alchemy.conf.deselectAll?alchemy.conf.deselectAll():void 0}}}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.Layout=function(){function b(){this.linkDistancefn=a(this.linkDistancefn,this),this.tick=a(this.tick,this),this.collide=a(this.collide,this),this.linkStrength=a(this.linkStrength,this),this.gravity=a(this.gravity,this);var b,c;b=alchemy.conf,c=alchemy._nodes,this.k=Math.sqrt(Math.log(_.size(alchemy._nodes))/(b.graphWidth()*b.graphHeight())),this._clustering=new alchemy.clustering,this.d3NodeInternals=_.keys(alchemy._nodes),b.cluster?(this._charge=function(){return this._clustering.layout.charge},this._linkStrength=function(a){return this._clustering.layout.linkStrength(a)}):(this._charge=function(){return-10/this.k},this._linkStrength=function(a){return c[a.source.id].properties.root||c[a.target.id].properties.root?1:.9}),b.cluster?this._linkDistancefn=function(a){return this._clustering.layout.linkDistancefn(a)}:"default"===b.linkDistancefn?this._linkDistancefn=function(){return 1/(50*this.k)}:"number"==typeof b.linkDistancefn?this._linkDistancefn=function(){return b.linkDistancefn}:"function"==typeof b.linkDistancefn&&(this._linkDistancefn=function(a){return b.linkDistancefn(a)})}return b.prototype.gravity=function(){return alchemy.conf.cluster?this._clustering.layout.gravity(this.k):50*this.k},b.prototype.linkStrength=function(a){return this._linkStrength(a)},b.prototype.friction=function(){return alchemy.conf.cluster?.7:.9},b.prototype.collide=function(a){var b,c,d,e,f,g;return a=a._d3,b=alchemy.conf,g=2*(a.r+a["stroke-width"])+b.nodeOverlap,c=a.x-g,d=a.x+g,e=a.y-g,f=a.y+g,function(b,h,i,j,k){var l,m,n;return b.point&&b.point!==a&&(m=a.x-Math.abs(b.point.x),n=a.y-b.point.y,l=Math.sqrt(m*m+n*n),g=g,g>l&&(l=(l-g)/l*alchemy.conf.alpha,a.x-=m*=l,a.y-=n*=l,b.point.x+=m,b.point.y+=n)),h>d||c>j||i>f||e>k}},b.prototype.tick=function(){var a,b,c,d,e;if(alchemy.conf.collisionDetection)for(b=d3.geom.quadtree(this.d3NodeInternals),e=_.values(alchemy._nodes),c=0,d=e.length;d>c;c++)a=e[c],b.visit(this.collide(a));return alchemy.node.attr("transform",function(a){return"translate("+a.x+","+a.y+")"}),null==this.drawEdge&&(this.drawEdge=new alchemy.drawing.DrawEdge),this.drawEdge.styleText(alchemy.edge),this.drawEdge.styleLink(alchemy.edge)},b.prototype.positionRootNodes=function(){var a,b,c,d,e,f,g,h,i,j;if(a=alchemy.conf,b={width:a.graphWidth(),height:a.graphHeight()},e=_.filter(alchemy._nodes,function(a){return a.properties.root}),1!==e.length){for(d=0,j=[],f=0,g=e.length;g>f;f++)c=e[f],d++,c._d3.x=b.width/Math.sqrt(e.length*d),c._d3.y=b.height/2,j.push(c._d3.fixed=!0);return j}c=e[0],h=[b.width/2,b.width/2],c._d3.x=h[0],c._d3.px=h[1],i=[b.height/2,b.height/2],c._d3.y=i[0],c._d3.py=i[1],c._d3.fixed=!0},b.prototype.chargeDistance=function(){return 500},b.prototype.linkDistancefn=function(a){return this._linkDistancefn(a)},b.prototype.charge=function(){return this._charge()},b}(),alchemy.generateLayout=function(a){var b;return null==a&&(a=!1),b=alchemy.conf,alchemy.layout=new alchemy.Layout,alchemy.force=d3.layout.force().size([b.graphWidth(),b.graphHeight()]).nodes(_.map(alchemy._nodes,function(a){return a._d3})).links(_.map(alchemy._edges,function(a){return a._d3})),alchemy.force.charge(alchemy.layout.charge()).linkDistance(function(a){return alchemy.layout.linkDistancefn(a)}).theta(1).gravity(alchemy.layout.gravity()).linkStrength(function(a){return alchemy.layout.linkStrength(a)}).friction(alchemy.layout.friction()).chargeDistance(alchemy.layout.chargeDistance()),alchemy.updateGraph()}}.call(this),function(){}.call(this),function(){alchemy.search={init:function(){var a;return a=d3.select("#search input"),a.on("keyup",function(){var b;return b=a[0][0].value.toLowerCase(),d3.selectAll(".node").classed("inactive",!1),d3.selectAll("text").attr("style",function(){return""!==b?"display: inline;":void 0}),d3.selectAll(".node").classed("inactive",function(a){var c,d;return c=d3.select(this),"contains"===alchemy.conf.searchMethod&&(d=c.text().toLowerCase().indexOf(b)<0),"begins"===alchemy.conf.searchMethod&&(d=0!==c.text().toLowerCase().indexOf(b)),d?d3.selectAll("[source-target*='"+a.id+"']").classed("inactive",d):d3.selectAll("[source-target*='"+a.id+"']").classed("inactive",function(a){var b,c,d;return b=[a.source.id,a.target.id],c=d3.select("#node-"+b[0]).classed("inactive"),d=d3.select("#node-"+b[1]).classed("inactive"),d||c}),d})})}}}.call(this),function(){alchemy.startGraph=function(a){var b,c,d,e,f,g;return c=alchemy.conf,d3.select(c.divSelector).empty()&&console.warn(alchemy.utils.warnings.divWarning()),a||alchemy.utils.warnings.dataWarning(),alchemy._nodes={},alchemy._edges={},a.nodes.forEach(function(a){return alchemy._nodes[a.id]=new alchemy.models.Node(a)}),a.edges.forEach(function(a){var b;return b=new alchemy.models.Edge(a),alchemy._edges[b.id]=b}),alchemy.vis=d3.select(c.divSelector).attr("style","width:"+c.graphWidth()+"px; height:"+c.graphHeight()+"px").append("svg").attr("xmlns","http://www.w3.org/2000/svg").attr("pointer-events","all").on("dblclick.zoom",null).on("click",alchemy.interactions.deselectAll).call(alchemy.interactions.zoom(c.scaleExtent)).append("g").attr("transform","translate("+c.initialTranslate+") scale("+c.initialScale+")"),f=new alchemy.editor.Interactions,d3.select("body").on("keydown",f.deleteSelected),alchemy.generateLayout(),alchemy.controlDash.init(),c.forceLocked||alchemy.force.on("tick",alchemy.layout.tick).start(),null!=c.afterLoad&&("function"==typeof c.afterLoad?c.afterLoad():"string"==typeof c.afterLoad&&(alchemy[c.afterLoad]=!0)),c.initialScale!==alchemy.defaults.initialScale?void alchemy.interactions.zoom().scale(c.initialScale):c.initialTranslate!==alchemy.defaults.initialTranslate?void alchemy.interactions.zoom().translate(c.initialTranslate):((c.cluster||c.directedEdges)&&(d=d3.select(""+alchemy.conf.divSelector+" svg").append("svg:defs")),c.directedEdges&&(b=c.edgeArrowSize,g=d.append("svg:marker").attr("id","arrow").attr("viewBox","0 -"+.4*b+" "+b+" "+b).attr("markerUnits","userSpaceOnUse").attr("markerWidth",b).attr("markerHeight",b).attr("orient","auto"),g.append("svg:path").attr("d","M "+b+",0 L 0,"+.4*b+" L 0,-"+.4*b),c.curvedEdges?g.attr("refX",b+1):g.attr("refX",1)),c.showEditor?(e=new alchemy.editor.Editor,e.startEditor()):void 0)}}.call(this),function(){alchemy.stats={init:function(){return alchemy.stats.update()},nodeStats:function(){var a,b,c,d,e,f,g,h,i,j,k,l;if(g="",f=d3.selectAll(".node")[0].length,a=d3.selectAll(".node.active")[0].length,c=d3.selectAll(".node.inactive")[0].length,g+="Number of nodes: "+f+"",g+="Number of active nodes: "+a+"",g+="Number of inactive nodes: "+c+"",alchemy.conf.nodeTypes){for(e=Object.keys(alchemy.conf.nodeTypes),i="",l=alchemy.conf.nodeTypes[e],j=0,k=l.length;k>j;j++)h=l[j],b=h.replace("_"," "),f=d3.selectAll("g.node."+h)[0].length,i+="Number of nodes of type "+b+": "+f+"";g+=i}return d="",g+=d,$("#node-stats").html(g)},edgeStats:function(){var a,b,c,d,e,f,g,h,i,j,k,l,m,n;if(d=null,f=d3.selectAll(".edge")[0].length,a=d3.selectAll(".edge.active")[0].length,h=d3.selectAll(".edge.inactive")[0].length,e="Number of relationships: "+f+" Number of active relationships: "+a+" Number of inactive relationships: "+h+" ",alchemy.conf.edgeTypes){for(d=[],m=d3.selectAll(".edge")[0],i=0,k=m.length;k>i;i++)c=m[i],currentRelationshipTypes[[c].caption]=!0;for(n=alchemy.conf.edgeTypes,j=0,l=n.length;l>j;j++)g=n[j],g&&(b=g.replace("_"," "),f=d3.selectAll(".edge."+g)[0].length,d.push([""+b,f]))}return $("#rel-stats").html(e),alchemy.stats.insertSVG("edge",d),d},nodeStats:function(){var a,b,c,d,e,f,g,h,i,j,k;if(c=null,h=d3.selectAll(".node")[0].length,a=d3.selectAll(".node.active")[0].length,b=d3.selectAll(".node.inactive")[0].length,alchemy.conf.nodeTypes)for(c=[],e=Object.keys(alchemy.conf.nodeTypes),k=alchemy.conf.nodeTypes[e],i=0,j=k.length;j>i;i++)g=k[i],f=d3.selectAll("g.node."+g)[0].length,c.push([""+g,f]);return d="Number of nodes: "+h+" Number of active nodes: "+a+" Number of inactive nodes: "+b+" ",$("#node-stats").html(d),alchemy.stats.insertSVG("node",c),c},insertSVG:function(a,b){var c,d,e,f,g,h,i,j;return null===b?d3.select("#"+a+"-stats-graph").html("
There are no "+a+"Types listed in your conf.
"):(j=.25*alchemy.conf.graphWidth(),f=250,h=j/4,e=d3.scale.category20(),c=d3.svg.arc().outerRadius(h-10).innerRadius(h/2),g=d3.layout.pie().sort(null).value(function(a){return a[1]}),i=d3.select("#"+a+"-stats-graph").append("svg").append("g").style({width:j,height:f}).attr("transform","translate("+j/2+","+f/2+")"),d=i.selectAll(".arc").data(g(b)).enter().append("g").classed("arc",!0).on("mouseover",function(a,c){return d3.select("#"+b[c][0]+"-stat").classed("hidden",!1)}).on("mouseout",function(a,c){return d3.select("#"+b[c][0]+"-stat").classed("hidden",!0)}),d.append("path").attr("d",c).attr("stroke",function(a,b){return e(b)}).attr("stroke-width",2).attr("fill-opacity","0.3"),d.append("text").attr("transform",function(a){return"translate("+c.centroid(a)+")"}).attr("id",function(a,c){return""+b[c][0]+"-stat"}).attr("dy",".35em").classed("hidden",!0).text(function(a,c){return b[c][0]}))},update:function(){return alchemy.conf.nodeStats===!0&&alchemy.stats.nodeStats(),alchemy.conf.edgeStats===!0?alchemy.stats.edgeStats():void 0}}}.call(this),function(){alchemy.updateGraph=function(a){var b,c,d;if(null==a&&(a=!0),alchemy.edge=alchemy.vis.selectAll("g.edge").data(_.map(alchemy._edges,function(a){return a._d3}),function(a){return a.id}),alchemy.node=alchemy.vis.selectAll("g.node").data(_.map(alchemy._nodes,function(a){return a._d3}),function(a){return a.id}),a){for(alchemy.layout.positionRootNodes(),this.force.start();this.force.alpha()>.005;)alchemy.force.tick();b=new alchemy.drawing.DrawEdges,b.createEdge(alchemy.edge),c=new alchemy.drawing.DrawNodes,c.createNode(alchemy.node),d=!0,console.log(Date()+" completed initial computation")}return alchemy.vis.selectAll("g.node").attr("transform",function(a){return"translate("+a.x+", "+a.y+")"}),alchemy.node.exit().remove()}}.call(this),function(){alchemy.defaults={graphWidth:function(){return d3.select(this.divSelector).node().parentElement.clientWidth},graphHeight:function(){return"BODY"===d3.select(this.divSelector).node().parentElement.nodeName?window.innerHeight:d3.select(this.divSelector).node().parentElement.clientHeight},alpha:.5,collisionDetection:!0,nodeOverlap:25,fixNodes:!1,fixRootNodes:!1,forceLocked:!0,linkDistancefn:"default",nodePositions:null,showEditor:!1,captionToggle:!1,toggleRootNodes:!1,removeElement:!1,showControlDash:!1,cluster:!1,clusterKey:"cluster",clusterColours:d3.shuffle(["#DD79FF","#FFFC00","#00FF30","#5168FF","#00C0FF","#FF004B","#00CDCD","#f83f00","#f800df","#ff8d8f","#ffcd00","#184fff","#ff7e00"]),clusterControl:!0,showStats:!1,nodeStats:!1,edgeStats:!1,showFilters:!1,edgeFilters:!1,nodeFilters:!1,edgesToggle:!1,nodesToggle:!1,zoomControls:!1,nodeCaption:"caption",nodeStyle:{},nodeColour:null,nodeMouseOver:"caption",nodeRadius:10,nodeTypes:null,rootNodes:"root",rootNodeRadius:15,edgeCaption:"caption",edgeClick:"default",edgeStyle:function(){return null},edgeTypes:null,curvedEdges:!1,edgeWidth:4,edgeOverlayWidth:20,directedEdges:!1,edgeArrowSize:5,search:!0,searchMethod:"contains",afterLoad:"afterLoad",divSelector:"#alchemy",dataSource:null,initialScale:1,initialTranslate:[0,0],scaleExtent:[.5,2.4],dataWarning:"default",warningMessage:"There be no data! What's going on?"}}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.drawing.DrawEdge=function(){function b(){this.setInteractions=a(this.setInteractions,this),this.styleText=a(this.styleText,this),this.classEdge=a(this.classEdge,this),this.styleLink=a(this.styleLink,this),this.createLink=a(this.createLink,this);var b;b=alchemy.conf,this.curved=b.curvedEdges,this.directed=b.directedEdges,this.utils=new alchemy.drawing.EdgeUtils}return b.prototype.createLink=function(a){var b,c,d;return b=alchemy.conf,c=alchemy.interactions,d=this.utils,this.curved?(a.append("path").attr("class","edge-line").attr("id",function(a){return"path-"+a.id}),a.filter(function(a){return null!=a.caption}).append("text"),a.append("path").attr("class","edge-handler").style("stroke-width",""+b.edgeOverlayWidth)):(a.append("line").attr("class","edge-line").attr("shape-rendering","optimizeSpeed").style("stroke",function(a){return d.edgeStyle(a)}).style("stroke-width",b.edgeWidth),a.filter(function(a){return null!=a.caption}).append("text"),a.append("rect").attr("class","edge-handler"))},b.prototype.styleLink=function(a){var b,c;return b=alchemy.conf,c=this.utils,this.curved?(a.selectAll("path").attr("d",function(a){var b,d,e,f,g,h,i,j,k;return i=c.startLine(a),e=c.endLine(a),g=i.x,h=i.y,j=e.x,k=e.y,b=j-g,d=k-h,f=Math.sqrt(b*b+d*d),"M "+g+","+h+" A "+f+", "+f+" "+c.captionAngle(a)+" 0, 1 "+j+", "+k}),a.select("path.edge-line").style("stroke",function(a){return c.edgeStyle(a)})):(a.select(".edge-line").each(function(a){var b,d;return d=c.startLine(a),b=c.endLine(a),d3.select(this).attr({x1:d.x,y1:d.y,x2:b.x,y2:b.y})}),a.select(".edge-handler").attr("x",0).attr("y",-b.edgeOverlayWidth/2).attr("height",b.edgeOverlayWidth).attr("width",function(a){return c.edgeLength(a)}).attr("transform",function(a){return"translate("+a.source.x+", "+a.source.y+") rotate("+c.edgeAngle(a)+")"})),this.directed?a.select(".edge-line").attr("marker-end","url(#arrow)"):void 0},b.prototype.classEdge=function(a){return a.classed("active",!0)},b.prototype.styleText=function(a){var b;return b=this.utils,this.curved?a.select("text").attr("dx",function(a){return b.middlePath(a).x
+}).attr("dy",function(a){return b.middlePath(a).y+20}).attr("transform",function(a){return"rotate("+b.captionAngle(a)+" "+b.middlePath(a).x+" "+b.middlePath(a).y+")"}).text(function(a){return a.caption}):a.select("text").attr("dx",function(a){return b.middleLine(a).x}).attr("dy",function(a){return b.middleLine(a).y-5}).attr("transform",function(a){return"rotate("+b.captionAngle(a)+" "+b.middleLine(a).x+" "+b.middleLine(a).y+")"}).text(function(a){return a.caption})},b.prototype.setInteractions=function(a){var b,c;return b="editor"===alchemy.getState("interactions"),b?(c=new alchemy.editor.Interactions,a.select(".edge-handler").on("click",c.edgeClick)):a.select(".edge-handler").on("click",alchemy.interactions.edgeClick)},b}()}.call(this),function(){alchemy.drawing.DrawEdges=function(){function a(){this.utils=new alchemy.drawing.EdgeUtils,this.drawEdge=new alchemy.drawing.DrawEdge(this.utils)}return a.prototype.createEdge=function(a){return a.enter().append("g").attr("id",function(a){return"edge-"+a.id}).attr("class",function(a){var b;return b=alchemy._edges[a.id].properties.caption,"edge "+b}).attr("source-target",function(a){return""+a.source.id+"-"+a.target.id}),this.drawEdge.createLink(a),this.drawEdge.classEdge(a),this.drawEdge.styleLink(a),this.drawEdge.styleText(a),this.drawEdge.setInteractions(a),a.exit().remove()},a.prototype.updateEdge=function(a){return this.drawEdge.classEdge(a),this.drawEdge.styleLink(a),this.drawEdge.styleText(a),this.drawEdge.setInteractions(a)},a}()}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.drawing.DrawNode=function(){function b(){this.styleNode=a(this.styleNode,this),this.setInteractions=a(this.setInteractions,this),this.createNode=a(this.createNode,this),this.styleText=a(this.styleText,this);var b,c,d,e;c=alchemy.interactions,b=alchemy.conf,d=alchemy._nodes,c=alchemy.interactions,this.utils=new alchemy.drawing.NodeUtils,e=this.utils,this._styleText=function(a){return a.selectAll("text").attr("dy",function(a){return d[a.id].properties.root?b.rootNodeRadius/2:2*b.nodeRadius-5}).html(function(a){return e.nodeText(a)})},this._createNode=function(a){return a.append("circle").attr("id",function(a){return"circle-"+a.id}),a.append("svg:text").attr("id",function(a){return"text-"+a.id})},this._styleNode=function(a){return a.select("circle").attr("r",function(a){return a.r}).attr("shape-rendering","optimizeSpeed").attr("style",function(a){return e.nodeStyle(a)})},this._setInteractions=function(a){var c,d,e,f,g,h;return e="editor"===alchemy.getState("interactions"),c=alchemy.interactions,d=d3.behavior.drag().origin(Object).on("dragstart",null).on("drag",null).on("dragend",null),e?(f=new alchemy.editor.Interactions,a.on("mouseup",f.nodeMouseUp).on("mouseover",f.nodeMouseOver).on("mouseout",f.nodeMouseOut).on("dblclick",c.nodeDoubleClick).on("click",f.nodeClick)):(a.on("mouseup",null).on("mouseover",c.nodeMouseOver).on("mouseout",c.nodeMouseOut).on("dblclick",c.nodeDoubleClick).on("click",c.nodeClick),d=d3.behavior.drag().origin(Object).on("dragstart",c.nodeDragStarted).on("drag",c.nodeDragged).on("dragend",c.nodeDragended),b.fixNodes||(g=a.filter(function(a){return a.root!==!0}),g.call(d)),b.fixRootNodes?void 0:(h=a.filter(function(a){return a.root===!0}),h.call(d)))}}return b.prototype.styleText=function(a){return this._styleText(a)},b.prototype.createNode=function(a){return this._createNode(a)},b.prototype.setInteractions=function(a){return this._setInteractions(a)},b.prototype.styleNode=function(a){return this._styleNode(a)},b}()}.call(this),function(){alchemy.drawing.DrawNodes=function(){function a(){this.drawNode=new alchemy.drawing.DrawNode}return a.prototype.createNode=function(a){return a.enter().append("g").attr("class",function(a){var b;return b=alchemy._nodes[a.id].getProperties(),null!=a.nodeType?"node "+a.nodeType+" active":"node active"}).attr("id",function(a){return"node-"+a.id}).classed("root",function(a){return a.root}),this.drawNode.createNode(a),this.drawNode.styleNode(a),this.drawNode.styleText(a),this.drawNode.setInteractions(a),a.exit().remove()},a.prototype.updateNode=function(a){return this.drawNode.styleNode(a),this.drawNode.styleText(a),this.drawNode.setInteractions(a)},a}()}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.drawing.EdgeUtils=function(){function b(){this.captionAngle=a(this.captionAngle,this);var b,c,d,e,f,g,h;d=alchemy.conf,g=alchemy._nodes,e=alchemy._edges,alchemy.conf.cluster?(c=alchemy.layout._clustering,this.edgeStyle=function(a){var b,d,e,f;return b=alchemy.conf.clusterKey,g[a.source.id].properties.root||g[a.target.id].properties.root?(f=g[a.source.id].properties.root?g[a.target.id].properties[b]:g[a.source.id].properties[b],""+c.getClusterColour(f)):g[a.source.id].properties[b]===g[a.target.id].properties[b]?(f=g[a.source.id].properties[b],""+c.getClusterColour(f)):g[a.source.id].properties[b]!==g[a.target.id].properties[b]?(e=""+g[a.source.id].properties[b]+"-"+g[a.target.id].properties[b],d="cluster-gradient-"+e,"url(#"+d+")"):void 0}):this.edgeStyle=null==alchemy.conf.edgeStyle||alchemy.conf.cluster?function(){return""}:function(a){return""+alchemy.conf.edgeStyle(a)},h=function(a){return a*a},f=function(a){var b,c;return c=a.target.x-a.source.x,b=a.target.y-a.source.y,Math.sqrt(b*b+c*c)},this._edgeWalk=function(a,b){var c,e,g;return g=a.target.x-a.source.x,e=a.target.y-a.source.y,f=Math.sqrt(e*e+g*g),"middle"===b?(c=f/2,{x:a.source.x+g*c/f,y:a.source.y+e*c/f}):"linkStart"===b?d.curvedEdges?{x:a.source.x,y:a.source.y}:(c=a.source.r+a.source["stroke-width"],{x:a.source.x+g*c/f,y:a.source.y+e*c/f}):"linkEnd"===b?(c=d.curvedEdges?f:f-(a.target.r+a.target["stroke-width"]),d.directedEdges&&(c-=d.edgeArrowSize),{x:a.source.x+g*c/f,y:a.source.y+e*c/f}):void 0},b=alchemy.conf.edgeCaption,"string"==typeof b?this.edgeCaption=function(a){return e[a.id].properties[b]}:"function"==typeof b&&(this.edgeCaption=function(a){return b(e[a.id])})}return b.prototype.middleLine=function(a){return this._edgeWalk(a,"middle")},b.prototype.startLine=function(a){return this._edgeWalk(a,"linkStart")},b.prototype.endLine=function(a){return this._edgeWalk(a,"linkEnd")},b.prototype.edgeLength=function(a){var b,c,d;return d=a.target.x-a.source.x,b=a.target.y-a.source.y,c=Math.sqrt(b*b+d*d)},b.prototype.edgeAngle=function(a){var b,c;return c=a.target.x-a.source.x,b=a.target.y-a.source.y,Math.atan2(b,c)/Math.PI*180},b.prototype.captionAngle=function(a){var b;return b=this.edgeAngle(a),-90>b||b>90?b+=180:b},b.prototype.hyp=function(a){return hyp(a)},b.prototype.middlePath=function(a){var b,c;return c=d3.select("#path-"+a.id).node(),b=c.getPointAtLength(c.getTotalLength()/2),{x:b.x,y:b.y}},b}()}.call(this),function(){alchemy.drawing.NodeUtils=function(){function a(){var a,b;b=alchemy._nodes,a=alchemy.conf,this.nodeColours=a.cluster?function(b){var c,d,e,f,g;return g=alchemy._nodes[b.id].properties,d=alchemy.layout._clustering.clusterMap,c=alchemy.conf.clusterKey,f=d[g[c]]%a.clusterColours.length,e=a.clusterColours[f],""+e}:function(){var b;return a.nodeColour?b=a.nodeColour:""}}return a.prototype.nodeStyle=function(a){var b,c;return b=this.nodeColours(a),c="editor"===alchemy.getState("interactions")?"#E82C0C":b,"fill: "+b+"; stroke: "+b+"; stroke-width: "+a["stroke-width"]+";"},a.prototype.nodeText=function(a){var b,c;return c=alchemy._nodes[a.id],alchemy.conf.nodeCaption&&"string"==typeof alchemy.conf.nodeCaption?null!=c.properties[alchemy.conf.nodeCaption]?c.properties[alchemy.conf.nodeCaption]:"":alchemy.conf.nodeCaption&&"function"==typeof alchemy.conf.nodeCaption?(b=alchemy.conf.nodeCaption(c),(void 0===b||"undefined"===String(b))&&(alchemy.log.caption="At least one caption returned undefined",alchemy.conf.caption=!1),b):void 0},a}()}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.editor.Editor=function(){function b(){this.nodeEditor=a(this.nodeEditor,this),this.startEditor=a(this.startEditor,this),this.utils=new alchemy.editor.Utils}return b.prototype.editorContainerHTML='\n\n
\n - Remove Selected
\n - Editor mode enabled, click to disable editor interactions
\n
\n
',b.prototype.elementEditorHTML=function(a){return""+a+' Editor
\n\n'},b.prototype.startEditor=function(){var a,b,c,d,e;return a=alchemy.conf.divSelector,d=this.editorContainerHTML,b=d3.select(""+a+" #control-dash").append("div").attr("id","editor").html(d),b.select("#editor-header").on("click",function(){return d3.select("#element-options").classed("in")?d3.select("#editor-header>span").attr("class","fa fa-2x fa-caret-right"):d3.select("#editor-header>span").attr("class","fa fa-2x fa-caret-down")}),c=b.select("#element-options ul #editor-interactions").on("click",function(){return d3.select(this).attr("class",function(){return"editor"===alchemy.getState()?(alchemy.setState("interactions","default"),"inactive list-group-item"):(alchemy.setState("interactions","editor"),"active list-group-item")}).html(function(){return"editor"===alchemy.getState()?"Disable Editor Interactions":"Enable Editor Interactions"})}),b.select("#element-options ul #remove").on("click",function(){return alchemy.editor.remove()}),e=this.utils,c.on("click",function(){return d3.select("#editor-interactions").classed("active")?(e.disableEditor(),d3.select("#editor-interactions").classed({active:!1,inactive:!0}).html("Editor mode disabled, click to enable editor interactions")):(e.enableEditor(),d3.select("#editor-interactions").classed({active:!0,inactive:!1}).html("Editor mode enabled, click to disable editor interactions"))})},b.prototype.nodeEditor=function(a){var b,c,d,e,f,g,h,i,j,k,l,m;c=alchemy.conf.divSelector,d=d3.select(""+c+" #control-dash-wrapper #control-dash #editor"),i=d.select("#element-options"),f=this.elementEditorHTML("Node"),e=i.append("div").attr("id","node-editor").html(f),e.attr("class",function(){return d3.select("#editor-interactions").classed("active")?"enabled":"hidden"}),b=d.select("#node-editor form #add-property"),b.select("#node-add-prop-key").attr("placeholder","New Property Name").attr("value",null),b.select("#node-add-prop-value").attr("placeholder","New Property Value").attr("value",null),d3.select("#add-property-form").on("submit",function(){var a,b;return event.preventDefault(),a=d3.select("#add-prop-key").property("value"),a=a.replace(/\s/g,"_"),b=d3.select("#add-prop-value").property("value"),l(a,b,!0),d3.selectAll("#add-property .edited-property").classed({"edited-property":!1}),this.reset()}),g=alchemy._nodes[a.id].getProperties(),d3.select("#node-"+a.id).classed({editing:!0}),k=d.select("#node-editor #properties-list");for(j in g)m=g[j],h=k.append("div").attr("id","node-"+j).attr("class","property form-inline form-group"),h.append("label").attr("for","node-"+j+"-input").attr("class","form-control property-name").text(""+j),h.append("input").attr("id","node-"+j+"-input").attr("class","form-control property-value").attr("value",""+m);return d3.select("#properties-list").on("submit",function(){var a,b,c,d,e,f,g;for(event.preventDefault(),b=d3.selectAll(".edited-property"),g=b[0],e=0,f=g.length;f>e;e++)j=g[e],c=d3.select(j),a=c.select("label").text(),d=c.select("input").attr("value"),l(a,d,!1);return d3.selectAll("#node-properties-list .edited-property").classed({"edited-property":!1}),this.reset()}),d3.selectAll("#add-prop-key, #add-prop-value, .property").on("keydown",function(){return 13===d3.event.keyCode&&event.preventDefault(),d3.select(this).classed({"edited-property":!0})}),l=function(b,c,d){var e,f;return f=a.id,""!==b&&""!==c?(alchemy._nodes[f].setProperty(""+b,""+c),e=new alchemy.drawing.DrawNodes,e.updateNode(d3.select("#node-"+f)),d===!0?(d3.select("#node-add-prop-key").attr("value","property added/updated to key: "+b),d3.select("#node-add-prop-value").attr("value","property at "+b+" updated to: "+c)):d3.select("#node-"+b+"-input").attr("value","property at "+b+" updated to: "+c)):d===!0?(d3.select("#node-add-prop-key").attr("value","null or invalid input"),d3.select("#node-add-prop-value").attr("value","null or invlid input")):d3.select("#node-"+b+"-input").attr("value","null or invalid input")}},b.prototype.editorClear=function(){return d3.selectAll(".node").classed({editing:!1}),d3.selectAll(".edge").classed({editing:!1}),d3.select("#node-editor").remove(),d3.select("#edge-editor").remove(),d3.select("#node-add-prop-submit").attr("placeholder",function(){return d3.selectAll(".selected").empty()?"select a node or edge to edit properties":"add a property to this element"})},b.prototype.edgeEditor=function(a){var b,c,d,e,f,g,h,i,j,k,l,m;c=alchemy.conf.divSelector,f=d3.select(""+c+" #control-dash-wrapper #control-dash #editor"),i=f.select("#element-options"),h=this.elementEditorHTML("Edge"),g=i.append("div").attr("id","edge-editor").html(h),g.attr("class",function(){return d3.select("#editor-interactions").classed("active")?"enabled":"hidden"}),b=f.select("#edge-editor form #add-property"),b.select("#add-prop-key").attr("placeholder","New Property Name").attr("value",null),b.select("#add-prop-value").attr("placeholder","New Property Value").attr("value",null),d=alchemy._edges[a.id].getProperties(),d3.select("#edge-"+a.id).classed({editing:!0}),k=f.select("#edge-editor #properties-list");for(j in d)m=d[j],e=k.append("div").attr("id","edge-"+j).attr("class","property form-inline form-group"),e.append("label").attr("for","edge-"+j+"-input").attr("class","form-control property-name").text(""+j),e.append("input").attr("id","edge-"+j+"-input").attr("class","form-control property-value").attr("value",""+m);return d3.selectAll("#add-prop-key, #add-prop-value, .property").on("keydown",function(){return 13===d3.event.keyCode&&event.preventDefault(),d3.select(this).classed({"edited-property":!0})}),d3.select("#add-property-form").on("submit",function(){var a,b;return event.preventDefault(),a=d3.select("#add-prop-key").property("value"),a=a.replace(/\s/g,"_"),b=d3.select("#add-prop-value").property("value"),l(a,b,!0),d3.selectAll("#add-property .edited-property").classed({"edited-property":!1}),this.reset()}),d3.select("#properties-list").on("submit",function(){var a,b,c,d,e,f,g;for(event.preventDefault(),b=d3.selectAll(".edited-property"),g=b[0],e=0,f=g.length;f>e;e++)j=g[e],c=d3.select(j),a=c.select("label").text(),d=c.select("input").property("value"),l(a,d,!1);return d3.selectAll("#properties-list .edited-property").classed({"edited-property":!1}),this.reset()}),l=function(b,c,d){var e,f,g;return f=a.id,""!==b&&""!==c?(alchemy._edges[f].setProperty(""+b,""+c),g=d3.select("#edge-"+f),e=new alchemy.drawing.DrawEdges,e.updateEdge(d3.select("#edge-"+f)),d===!0?(d3.select("#add-prop-key").attr("value","property added/updated to key: "+b),d3.select("#add-prop-value").attr("value","property at "+b+" updated to: "+c)):d3.select("#edge-"+b+"-input").attr("value","property at "+b+" updated to: "+c)):d===!0?(d3.select("#add-prop-key").attr("value","null or invalid input"),d3.select("#add-prop-value").attr("value","null or invlid input")):d3.select("#edge-"+b+"-input").attr("value","null or invalid input")}},b}()}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.editor.Interactions=function(){function b(){this.reset=a(this.reset,this),this.deleteSelected=a(this.deleteSelected,this),this.addNodeDragended=a(this.addNodeDragended,this),this.addNodeDragging=a(this.addNodeDragging,this),this.addNodeStart=a(this.addNodeStart,this),this.edgeClick=a(this.edgeClick,this),this.nodeClick=a(this.nodeClick,this),this.nodeMouseUp=a(this.nodeMouseUp,this),this.editor=new alchemy.editor.Editor}return b.prototype.nodeMouseOver=function(){var a;return d3.select(this).select("circle").empty()||(a=d3.select(this).select("circle").attr("r"),d3.select(this).select("circle").attr("r",3*a)),this},b.prototype.nodeMouseUp=function(a){return this.sourceNode!==a?(this.mouseUpNode=!0,this.targetNode=a,this.click=!1):this.click=!0,this},b.prototype.nodeMouseOut=function(){var a;return d3.select(this).select("circle").empty()||(a=d3.select(this).select("circle").attr("r"),d3.select(this).select("circle").attr("r",a/3)),this},b.prototype.nodeClick=function(a){var b;return d3.event.stopPropagation(),alchemy.vis.select("#node-"+a.id).empty()||(b=alchemy.vis.select("#node-"+a.id).classed("selected"),alchemy.vis.select("#node-"+a.id).classed("selected",!b)),this.editor.editorClear(),this.editor.nodeEditor(a)},b.prototype.edgeClick=function(a){return d3.event.stopPropagation(),this.editor.editorClear(),this.editor.edgeEditor(a)},b.prototype.addNodeStart=function(a){return d3.event.sourceEvent.stopPropagation(),this.sourceNode=a,d3.select("#dragline").classed({hidden:!1}),this},b.prototype.addNodeDragging=function(){var a,b;return a=d3.event.x,b=d3.event.y,d3.select("#dragline").attr("x1",this.sourceNode.x).attr("y1",this.sourceNode.y).attr("x2",a).attr("y2",b).attr("style","stroke: #FFF"),this},b.prototype.addNodeDragended=function(){var a,b,c;return this.click||(this.mouseUpNode||(a=d3.select("#dragline"),b=a.attr("x2"),c=a.attr("y2"),this.targetNode={id:""+_.uniqueId("addedNode_"),x:parseFloat(b),y:parseFloat(c),caption:"node added"}),this.newEdge={id:""+this.sourceNode.id+"-"+this.targetNode.id,source:this.sourceNode.id,target:this.targetNode.id,caption:"edited"},alchemy.editor.update(this.targetNode,this.newEdge)),this.reset(),this},b.prototype.deleteSelected=function(){switch(d3.event.keyCode){case 8:case 46:if("INPUT"!==d3.select(d3.event.target).node().tagName)return d3.event.preventDefault(),alchemy.editor.remove()}},b.prototype.reset=function(){return this.mouseUpNode=null,this.sourceNode=null,this.targetNode=null,this.newEdge=null,this.click=null,d3.select("#dragline").classed({hidden:!0}).attr("x1",0).attr("y1",0).attr("x2",0).attr("y2",0),this},b}()}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.editor.Utils=function(){function b(){this.enableEditor=a(this.enableEditor,this),this.drawNodes=new alchemy.drawing.DrawNodes,this.drawEdges=new alchemy.drawing.DrawEdges}return b.prototype.enableEditor=function(){var a,b,c;return alchemy.setState("interactions","editor"),a=alchemy.vis.append("line").attr("id","dragline"),this.drawNodes.updateNode(alchemy.node),this.drawEdges.updateEdge(alchemy.edge),c=d3.selectAll(".selected"),b=new alchemy.editor.Editor,c.empty()||1!==c.length?c.classed({selected:!1}):c.classed("node")?(b.nodeEditor(c.datum()),d3.select("#node-editor").attr("class","enabled").style("opacity",1)):c.classed("edge")?(b.edgeEditor(c.datum()),d3.select("#edge-editor").attr("class","enabled").style("opacity",1)):void 0},b.prototype.disableEditor=function(){return alchemy.setState("interactions","default"),alchemy.vis.select("#dragline").remove(),d3.select("#node-editor").transition().duration(300).style("opacity",0),d3.select("#node-editor").transition().delay(300).attr("class","hidden"),this.drawNodes.updateNode(alchemy.node),d3.selectAll(".node").classed({selected:!1})},b.prototype.remove=function(){var a,b,c,d,e,f,g,h,i,j,k,l;for(e=d3.selectAll(".selected.node"),j=e[0],l=[],f=0,h=j.length;h>f;f++)if(b=j[f],c=d3.select(b).data()[0].id,d=alchemy._nodes[c],null!=d){for(k=d.adjacentEdges,g=0,i=k.length;i>g;g++)a=k[g],alchemy._edges=_.omit(alchemy._edges,""+a),alchemy.edge=alchemy.edge.data(_.map(alchemy._edges,function(a){return a._d3}),function(a){return a.id}),d3.select("#edge-"+a).remove();alchemy._nodes=_.omit(alchemy._nodes,""+c),alchemy.node=alchemy.node.data(_.map(alchemy._nodes,function(a){return a._d3}),function(a){return a.id}),d3.select(b).remove(),l.push("editor"===alchemy.getState("interactions")?alchemy.modifyElements.nodeEditorClear():void 0)}else l.push(void 0);return l},b.prototype.addNode=function(a){var b;return b=alchemy._nodes[a.id]=new alchemy.models.Node({id:""+a.id}),b.setProperty("caption",a.caption),b.setD3Property("x",a.x),b.setD3Property("y",a.y),alchemy.node=alchemy.node.data(_.map(alchemy._nodes,function(a){return a._d3}),function(a){return a.id})},b.prototype.addEdge=function(a){var b;return b=alchemy._edges[a.id]=new alchemy.models.Edge(a),alchemy.edge=alchemy.edge.data(_.map(alchemy._edges,function(a){return a._d3}),function(a){return a.id})},b.prototype.update=function(a,b){return this.mouseUpNode?(alchemy.editor.addEdge(b),this.drawEdges.createEdge(alchemy.edge)):(alchemy.editor.addNode(a),alchemy.editor.addEdge(b),this.drawEdges.createEdge(alchemy.edge),this.drawNodes.createNode(alchemy.node)),alchemy.layout.tick()},b}()}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.models.Edge=function(){function b(b){this.allNodesActive=a(this.allNodesActive,this),this.getProperties=a(this.getProperties,this),this.setD3Property=a(this.setD3Property,this),this.setProperty=a(this.setProperty,this),this.toPublic=a(this.toPublic,this);var c,d;d=alchemy.conf,this.id=null!=b.id?b.id:""+b.source+"-"+b.target,this.edgeStyle=_.merge(d.edgeStyle,this.edgeStyle),this.state={active:!0},this.properties=b,this._edgeAttributes=new alchemy.models.EdgeAttributes,c=this._edgeAttributes.edgeCaption(this.properties),c&&(this.properties.caption=c),this._d3={id:this.id,source:alchemy._nodes[this.properties.source]._d3,target:alchemy._nodes[this.properties.target]._d3,caption:c},alchemy._nodes[""+b.source].addEdge(this.id),alchemy._nodes[""+b.target].addEdge(this.id)}return b.prototype.toPublic=function(){var a;return a=_.keys(this.properties),_.pick(this,a)},b.prototype.setProperty=function(a,b){return this.properties[a]=b,"source"===a||"target"===a?this.setD3Property(a,alchemy._nodes[b]._d3):void 0},b.prototype.setD3Property=function(a,b){return this._d3[a]=b},b.prototype.getProperties=function(){return this.properties},b.prototype.allNodesActive=function(){var a,b;return a=d3.select("#node-"+this.properties.source),b=d3.select("#node-"+this.properties.target),!a.classed("inactive")&&!b.classed("inactive")},b}()}.call(this),function(){alchemy.models.EdgeAttributes=function(){function a(){var a,b;b=alchemy.conf,a=b.edgeCaption,"string"==typeof a?this.edgeCaption=function(b){return b[a]}:"function"==typeof a&&(this.edgeCaption=function(b){return a(b)})}return a}()}.call(this),function(){}.call(this),function(){var a=function(a,b){return function(){return a.apply(b,arguments)}};alchemy.models.Node=function(){function b(c){this.removeProperty=a(this.removeProperty,this),this.setD3Property=a(this.setD3Property,this),this.setProperty=a(this.setProperty,this),this.getProperties=a(this.getProperties,this);var d,e,f;d=alchemy.conf,e=new alchemy.models.NodeAttributes,f=e.nodeSize(c),this.id=c.id,this.properties=c,this.state={active:!0},this._d3={id:c.id,r:f,"stroke-width":e.strokeWidth(f),root:this.properties[d.rootNodes]},this.nodeStyle=_.merge(d.nodeStyle,this.nodeStyle),this.adjacentEdges=[],b.prototype.all.push(this.id),d.nodeTypes&&(this.nodeType=this.properties[Object.keys(alchemy.conf.nodeTypes)],this.nodeType&&(this._d3.nodeType=this.nodeType))}return b.prototype.addEdge=function(a){return this.adjacentEdges.push(a),this.adjacentEdges=_.uniq(this.adjacentEdges)},b.prototype.outDegree=function(){return this.adjacentEdges.length},b.prototype.neighbors=function(){var a;return a=new RegExp("[("+this.id+"\\-)(\\-"+this.id+")]","g"),_.map(this.adjacentEdges,function(b){return b.replace(a,"")})},b.prototype.getProperties=function(){return this.properties},b.prototype.setProperty=function(a,b){return this.properties[a]=b},b.prototype.setD3Property=function(a,b){return this._d3[a]=b},b.prototype.removeProperty=function(a){return null!=this.properties.property?_.omit(this.properties,a):void 0},b.prototype.all=[],b}()}.call(this),function(){alchemy.models.NodeAttributes=function(){function a(){var a;a=alchemy.conf.rootNodes,"function"==typeof alchemy.conf.nodeRadius?this.nodeSize=function(b){return null!=b[a]&&d[a]?alchemy.conf.rootNodeRadius(b):alchemy.conf.nodeRadius(b)}:"string"==typeof alchemy.conf.nodeRadius?this.nodeSize=function(b){var c;return c=alchemy.conf.nodeRadius,null!=b[a]?alchemy.conf.rootNodeRadius:null!=b[c]?b[c]:alchemy.defaults.rootNodeRadius}:"number"==typeof alchemy.conf.nodeRadius&&(this.nodeSize=function(b){return null!=b[a]?alchemy.conf.rootNodeRadius:alchemy.conf.nodeRadius})}return a.prototype.strokeWidth=function(a){return a/3},a}()}.call(this),function(){alchemy.utils.warnings={dataWarning:function(){var a;return alchemy.conf.dataWarning&&"function"==typeof alchemy.conf.dataWarning?alchemy.conf.dataWarning():void("default"===alchemy.conf.dataWarning&&(a='\n
\n
\n \n
\n
'+alchemy.conf.warningMessage+'
\n
\n \n
\n
\n
',$("body").append(a),$("#no-results").modal("show"),$("#loading-spinner").hide()))},divWarning:function(){return"create an element that matches the value for 'divSelector' in your conf.\nFor instance, if you are using the default 'divSelector' conf, simply provide\n."}}}.call(this);
\ No newline at end of file
diff --git a/dist/scripts/vendor.js b/dist/scripts/vendor.js
new file mode 100644
index 0000000..c4c3f2d
--- /dev/null
+++ b/dist/scripts/vendor.js
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