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DESCRIPTION
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Package: spatialTIME
Title: Spatial Analysis of Vectra Immunoflourescent Data
Version: 1.3.4-5
Authors@R:
c(person(given = "Jordan", family = "Creed", role = "aut",
email = "[email protected]"),
person("Ram", "Thapa", role = c("aut"),
email = "[email protected]"),
person(given = "Christopher", family = "Wilson", role = "aut",
email = "[email protected]"),
person(given = "Alex", family = "Soupir", role = "aut",
email = "[email protected]"),
person(given = "Oscar", family = "Ospina", role = "aut",
email = "[email protected]"),
person(given = "Julia", family = "Wrobel", role = "aut",
email = "[email protected]"),
person(given = "Brooke", family = "Fridley", role = "cph",
email = "[email protected]"),
person(given = "Fridley", family = "Lab", role = "cre",
email = "[email protected]"))
Description: Visualization and analysis of Vectra Immunoflourescent
data. Options for calculating both the univariate and bivariate Ripley's K
are included. Calculations are performed using a permutation-based
approach presented by Wilson et al. <doi:10.1101/2021.04.27.21256104>.
License: MIT + file LICENSE
Imports:
magrittr,
dplyr,
tidyr,
ggplot2,
scales,
grDevices,
purrr,
spatstat.univar,
spatstat.geom,
spatstat.explore,
RColorBrewer,
furrr,
future,
tidyselect,
crayon,
pbmcapply,
dixon,
tibble,
stringr
Suggests:
knitr,
devtools,
rmarkdown,
testthat (>= 3.0.0),
gridExtra,
pheatmap
VignetteBuilder: knitr
URL: https://github.com/FridleyLab/spatialTIME
BugReports: https://github.com/FridleyLab/spatialTIME/issues
NeedsCompilation: no
Packaged: 2021-08-19 22:31:18 UTC; 4468179
Config/testthat/edition: 3
RoxygenNote: 7.2.3
Depends:
R (>= 2.10)
LazyData: true
Encoding: UTF-8