test_train.sh

#!/usr/bin/env bash

SCRIPTPATH="$( cd "$(dirname "$0")" ; pwd -P )"
# echo $SCRIPTPATH
. ./build.sh

docker volume create noduledetection-output

time docker run --rm \
        --network none \
        --gpus all \
        --memory=20g \
        --shm-size 16G \
        -e NVIDIA_VISIBLE_DEVICES=0 \
        -v /home/Behrendt//projects/Node21/node21-submit//input_train/:/input/ \
        -v /home/Behrendt//projects/Node21/node21-submit/output:/output/ \
        noduledetector \
        --train  >&1 | tee -a log_train.txt
# docker run --rm \
#         --network none \
#         --gpus 0 \
#         --memory=11g \
#         --shm-size 8G \
#         -e NVIDIA_VISIBLE_DEVICES=0 \
#         -v /home/Behrendt//projects/Node21/node21-submit//input_train/:/input/ \
#         -v noduledetection-output:/output/ \
#         noduledetector \
#         --retrain
docker run --rm \
        --network none \
        --gpus all \
        --memory=20g \
        --shm-size 16G \
        -e NVIDIA_VISIBLE_DEVICES=0 \
        -v /home/Behrendt/projects/Node21/node21-submit/output/:/input/ \
        -v noduledetection-output:/output/ \
        noduledetector \
        --retest
# docker run --rm -v noduledetection-output:/output/ python:3.7-slim cat /output/nodules.json | python3 -m json.tool
# echo "inputs"
# docker run --rm -v $SCRIPTPATH/test/:/input/ python:3.7-slim cat /input/expected_output.json | python3 -m json.tool

# docker run --rm \
#         --network none \
#         --gpus all \
#         -v noduledetection-output:/output/ \
#         -v $SCRIPTPATH/test/:/input/ \
#         python:3.7-slim python3 -c "import json, sys; f1 = json.load(open('/output/nodules.json')); f2 = json.load(open('/input/expected_output.json')); print(f1!=f2); sys.exit(f1 != f2);"

# if [ $? -eq 0 ]; then
#     echo "Tests successfully passed..."
# else
#     echo "Expected output was not found..."
# fi

docker volume rm noduledetection-output