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AWS-related wrappers need to use Slurm, not SGE #15

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rlbyrne opened this issue Aug 27, 2020 · 1 comment · May be fixed by #18
Open

AWS-related wrappers need to use Slurm, not SGE #15

rlbyrne opened this issue Aug 27, 2020 · 1 comment · May be fixed by #18

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@rlbyrne
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rlbyrne commented Aug 27, 2020

AWS ParallelCluster is deprecating SGE (https://github.com/aws/aws-parallelcluster/wiki/Deprecation-of-SGE-and-Torque-in-ParallelCluster). In response, we need to migrate to Slurm.
@rlbyrne
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rlbyrne commented Sep 3, 2020

In order to run Slurm with ParallelCluster, edit the .parallelcluster/config file by adding the following under the cluster heading: scheduler = slurm

@rlbyrne rlbyrne linked a pull request Sep 3, 2020 that will close this issue
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Use Slurm instead of SGE on AWS EoRImaging/pipeline_scripts
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