From 64a2f63f4b0777647ae1564d0edc0ba269e3c591 Mon Sep 17 00:00:00 2001 From: Anne Bertolini Date: Mon, 22 Jan 2024 14:30:23 +0100 Subject: [PATCH] [DOC] Add link to dsb_r-base_4.2.3.sif in README --- README.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 15c6b36..3e962bf 100644 --- a/README.md +++ b/README.md @@ -53,7 +53,8 @@ In case you would like to start from the raw sequencing data using cellranger pr - [Cellranger](https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger): Follow the instructions on the 10xGenomics installation support page to install cellranger and to include the cellranger binary to your path. Webpage: [https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/installation](https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/installation) -The `dsb` CRAN package is not available on Conda. Therefore, a singularity image `dsb_r-base_4.2.3.sif` containg `dsb` and all other R packages necessary for this step is available for download at XX. Please download the image and then provide the path in the config section dsb_normalize_adt -> singularity. +The `dsb` CRAN package is not available on Conda. Therefore, a singularity image `dsb_r-base_4.2.3.sif` containg `dsb` and all other R packages necessary for this step is available for download at [here](https://depot.nexus.ethz.ch/software/multi_tool_container_stack/dsb_r-base_4.2.3.sif). +Please download the image and then provide the path in the config section "dsb_normalize_adt" -> "singularity". ## Before running the pipeline