diff --git a/.Rbuildignore b/.Rbuildignore index 5e4a333..9fd5e30 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -1,2 +1,3 @@ ^LICENSE\.md$ ^\.github$ +^aclocal.m4$ diff --git a/NAMESPACE b/NAMESPACE index 8bd721b..4e1f546 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -30,4 +30,4 @@ importFrom(rlang,env_lock) importFrom(rlang,env_unlock) importFrom(utils,head) importFrom(utils,str) -useDynLib(rTrace) +useDynLib(rTrace, .registration = TRUE) diff --git a/R/RcppExports.R b/R/RcppExports.R index ecc2082..ea7c788 100644 --- a/R/RcppExports.R +++ b/R/RcppExports.R @@ -9,28 +9,28 @@ #' @param flag_print_pids True to print pids of parent and child procs #' @return <0 if error, 0 if R master, else >0 if child init_otf2_logger <- function(max_nprocs, archivePath, archiveName, collect_metrics, flag_print_pids) { - .Call('_rTrace_init_otf2_logger', PACKAGE = 'rTrace', max_nprocs, archivePath, archiveName, collect_metrics, flag_print_pids) + .Call(`_rTrace_init_otf2_logger`, max_nprocs, archivePath, archiveName, collect_metrics, flag_print_pids) } #' r_pmpmeas_init #' @description Wrapper for pmpmeas_init #' @return R_NilValue r_pmpmeas_init <- function() { - .Call('_rTrace_r_pmpmeas_init', PACKAGE = 'rTrace') + .Call(`_rTrace_r_pmpmeas_init`) } #' r_pmpmeas_finish #' @description Wrapper for pmpmeas_finish #' @return R_NilValue r_pmpmeas_finish <- function() { - .Call('_rTrace_r_pmpmeas_finish', PACKAGE = 'rTrace') + .Call(`_rTrace_r_pmpmeas_finish`) } #' r_pmpmeas_start #' @description Wrapper for pmpmeas_start #' @return R_NilValue r_pmpmeas_start <- function() { - .Call('_rTrace_r_pmpmeas_start', PACKAGE = 'rTrace') + .Call(`_rTrace_r_pmpmeas_start`) } #' r_pmpmeas_stop @@ -38,7 +38,7 @@ r_pmpmeas_start <- function() { #' @param weight Weight to scale metric values (eg average over N runs) #' @return R_NilValue r_pmpmeas_stop <- function(weight) { - .Call('_rTrace_r_pmpmeas_stop', PACKAGE = 'rTrace', weight) + .Call(`_rTrace_r_pmpmeas_stop`, weight) } #' assign_regionRef_array_master @@ -47,33 +47,33 @@ r_pmpmeas_stop <- function(weight) { #' @param num_funcs Required length of array to store regionRef for each func #' @return R_NilValue assign_regionRef_array_master <- function(num_funcs) { - .Call('_rTrace_assign_regionRef_array_master', PACKAGE = 'rTrace', num_funcs) + .Call(`_rTrace_assign_regionRef_array_master`, num_funcs) } #' assign_regionRef_array_slave #' @param num_funcs Required length of array to store regionRef for each func #' @return R_NilValue assign_regionRef_array_slave <- function(num_funcs) { - .Call('_rTrace_assign_regionRef_array_slave', PACKAGE = 'rTrace', num_funcs) + .Call(`_rTrace_assign_regionRef_array_slave`, num_funcs) } #' get_regionRef_from_array_slave #' @param func_index Index of function to get regionRef for #' @return regionRef get_regionRef_from_array_slave <- function(func_index) { - .Call('_rTrace_get_regionRef_from_array_slave', PACKAGE = 'rTrace', func_index) + .Call(`_rTrace_get_regionRef_from_array_slave`, func_index) } #' free_regionRef_array_slave #' @return R_NilValue free_regionRef_array_slave <- function() { - .Call('_rTrace_free_regionRef_array_slave', PACKAGE = 'rTrace') + .Call(`_rTrace_free_regionRef_array_slave`) } #' finalize_GlobalDefWriter_client #' @return RNilValue finalize_GlobalDefWriter_client <- function() { - .Call('_rTrace_finalize_GlobalDefWriter_client', PACKAGE = 'rTrace') + .Call(`_rTrace_finalize_GlobalDefWriter_client`) } #' define_otf2_regionRef_client @@ -81,39 +81,39 @@ finalize_GlobalDefWriter_client <- function() { #' @param func_index Global index of function in R namespace #' @return regionRef regionRef for use when logging events define_otf2_regionRef_client <- function(func_name, func_index) { - .Call('_rTrace_define_otf2_regionRef_client', PACKAGE = 'rTrace', func_name, func_index) + .Call(`_rTrace_define_otf2_regionRef_client`, func_name, func_index) } #' finalize_EvtWriter_client #' @return R_NilValue finalize_EvtWriter_client <- function() { - .Call('_rTrace_finalize_EvtWriter_client', PACKAGE = 'rTrace') + .Call(`_rTrace_finalize_EvtWriter_client`) } #' finalize_otf2_client #' @description Send signal to server to stop collecting event information #' @return R_NilValue finalize_otf2_client <- function() { - .Call('_rTrace_finalize_otf2_client', PACKAGE = 'rTrace') + .Call(`_rTrace_finalize_otf2_client`) } #' Send message to enable or disable event measurement from client side #' @param measurementMode True to enable, else disable #' @return R_NilValue evtWriter_MeasurementOnOff_client <- function(measurementMode) { - .Call('_rTrace_evtWriter_MeasurementOnOff_client', PACKAGE = 'rTrace', measurementMode) + .Call(`_rTrace_evtWriter_MeasurementOnOff_client`, measurementMode) } #' close_EvtWriterSocket_client #' @return R_NilValue close_EvtWriterSocket_client <- function() { - .Call('_rTrace_close_EvtWriterSocket_client', PACKAGE = 'rTrace') + .Call(`_rTrace_close_EvtWriterSocket_client`) } #' open_EvtWriterSocket_client #' @return R_NilValue open_EvtWriterSocket_client <- function() { - .Call('_rTrace_open_EvtWriterSocket_client', PACKAGE = 'rTrace') + .Call(`_rTrace_open_EvtWriterSocket_client`) } #' Write event to evt_writer @@ -121,34 +121,34 @@ open_EvtWriterSocket_client <- function() { #' @param event_type True for enter, False for leave region #' @return R_NilValue evtWriter_Write_client <- function(regionRef, event_type) { - .Call('_rTrace_evtWriter_Write_client', PACKAGE = 'rTrace', regionRef, event_type) + .Call(`_rTrace_evtWriter_Write_client`, regionRef, event_type) } #' set_locationRef #' @param id ID value belonging to this R proc #' @return R_NilValue set_locationRef <- function(id) { - .Call('_rTrace_set_locationRef', PACKAGE = 'rTrace', id) + .Call(`_rTrace_set_locationRef`, id) } #' get_locationRef #' @return locationRef Proc number between 0,nprocs-1 get_locationRef <- function() { - .Call('_rTrace_get_locationRef', PACKAGE = 'rTrace') + .Call(`_rTrace_get_locationRef`) } #' set_maxUsedLocationRef_client #' @param nprocs Current number of active evtWriters/procs #' @return maxUsedLocationRef Current maximum evtWriters which were active so far set_maxUsedLocationRef_client <- function(nprocs) { - .Call('_rTrace_set_maxUsedLocationRef_client', PACKAGE = 'rTrace', nprocs) + .Call(`_rTrace_set_maxUsedLocationRef_client`, nprocs) } #' print_errnos #' @description Print error numbers relating to zmq sockets #' @return R_NilValue print_errnos <- function() { - .Call('_rTrace_print_errnos', PACKAGE = 'rTrace') + .Call(`_rTrace_print_errnos`) } #' get_regionRef_array_master @@ -156,14 +156,14 @@ print_errnos <- function() { #' @param nprocs Number of new procs to update #' @return R_NilValue get_regionRef_array_master <- function(nprocs) { - .Call('_rTrace_get_regionRef_array_master', PACKAGE = 'rTrace', nprocs) + .Call(`_rTrace_get_regionRef_array_master`, nprocs) } #' stopCluster_master #' @description Signal to end cluster #' @return R_NilValue stopCluster_master <- function() { - .Call('_rTrace_stopCluster_master', PACKAGE = 'rTrace') + .Call(`_rTrace_stopCluster_master`) } #' get_regionRef_array_slave @@ -171,21 +171,21 @@ stopCluster_master <- function() { #' @param num_funcs Total number of functions in R namespace #' @return R_NilValue get_regionRef_array_slave <- function(num_funcs) { - .Call('_rTrace_get_regionRef_array_slave', PACKAGE = 'rTrace', num_funcs) + .Call(`_rTrace_get_regionRef_array_slave`, num_funcs) } #' get_pid get_pid <- function() { - .Call('_rTrace_get_pid', PACKAGE = 'rTrace') + .Call(`_rTrace_get_pid`) } #' get_tid get_tid <- function() { - .Call('_rTrace_get_tid', PACKAGE = 'rTrace') + .Call(`_rTrace_get_tid`) } #' get_ppid get_ppid <- function() { - .Call('_rTrace_get_ppid', PACKAGE = 'rTrace') + .Call(`_rTrace_get_ppid`) } diff --git a/R/rTrace.R b/R/rTrace.R index 1302ba7..9b40962 100644 --- a/R/rTrace.R +++ b/R/rTrace.R @@ -16,7 +16,7 @@ # instrumentation_finalize() # } -#' @useDynLib rTrace +#' @useDynLib rTrace, .registration = TRUE #' @importFrom Rcpp evalCpp #' @importFrom methods is #' @importFrom utils head str @@ -24,6 +24,8 @@ #' @importFrom rlang env_unlock env_lock env_binding_unlock env_binding_lock #' @importFrom parallelly availableCores #' @exportPattern "^[[:alpha:]]+" +## @useDynLib rTrace, .registration=TRUE +## @useDynLib rTrace diff --git a/aclocal.m4 b/aclocal.m4 new file mode 100644 index 0000000..52a7f2b --- /dev/null +++ b/aclocal.m4 @@ -0,0 +1,1103 @@ +# generated automatically by aclocal 1.16.5 -*- Autoconf -*- + +# Copyright (C) 1996-2021 Free Software Foundation, Inc. + +# This file is free software; the Free Software Foundation +# gives unlimited permission to copy and/or distribute it, +# with or without modifications, as long as this notice is preserved. + +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY, to the extent permitted by law; without +# even the implied warranty of MERCHANTABILITY or FITNESS FOR A +# PARTICULAR PURPOSE. + +m4_ifndef([AC_CONFIG_MACRO_DIRS], [m4_defun([_AM_CONFIG_MACRO_DIRS], [])m4_defun([AC_CONFIG_MACRO_DIRS], [_AM_CONFIG_MACRO_DIRS($@)])]) +m4_ifndef([AC_AUTOCONF_VERSION], + [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl +m4_if(m4_defn([AC_AUTOCONF_VERSION]), [2.69],, +[m4_warning([this file was generated for autoconf 2.69. +You have another version of autoconf. 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Yes, it's still used +# in the wild :-( We should find a proper way to deprecate it ... +AC_SUBST([AMTAR], ['$${TAR-tar}']) + +# We'll loop over all known methods to create a tar archive until one works. +_am_tools='gnutar m4_if([$1], [ustar], [plaintar]) pax cpio none' + +m4_if([$1], [v7], + [am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -'], + + [m4_case([$1], + [ustar], + [# The POSIX 1988 'ustar' format is defined with fixed-size fields. + # There is notably a 21 bits limit for the UID and the GID. In fact, + # the 'pax' utility can hang on bigger UID/GID (see automake bug#8343 + # and bug#13588). + am_max_uid=2097151 # 2^21 - 1 + am_max_gid=$am_max_uid + # The $UID and $GID variables are not portable, so we need to resort + # to the POSIX-mandated id(1) utility. Errors in the 'id' calls + # below are definitely unexpected, so allow the users to see them + # (that is, avoid stderr redirection). + am_uid=`id -u || echo unknown` + am_gid=`id -g || echo unknown` + AC_MSG_CHECKING([whether UID '$am_uid' is supported by ustar format]) + if test $am_uid -le $am_max_uid; then + AC_MSG_RESULT([yes]) + else + AC_MSG_RESULT([no]) + _am_tools=none + fi + AC_MSG_CHECKING([whether GID '$am_gid' is supported by ustar format]) + if test $am_gid -le $am_max_gid; then + AC_MSG_RESULT([yes]) + else + AC_MSG_RESULT([no]) + _am_tools=none + fi], + + [pax], + [], + + [m4_fatal([Unknown tar format])]) + + AC_MSG_CHECKING([how to create a $1 tar archive]) + + # Go ahead even if we have the value already cached. We do so because we + # need to set the values for the 'am__tar' and 'am__untar' variables. + _am_tools=${am_cv_prog_tar_$1-$_am_tools} + + for _am_tool in $_am_tools; do + case $_am_tool in + gnutar) + for _am_tar in tar gnutar gtar; do + AM_RUN_LOG([$_am_tar --version]) && break + done + am__tar="$_am_tar --format=m4_if([$1], [pax], [posix], [$1]) -chf - "'"$$tardir"' + am__tar_="$_am_tar --format=m4_if([$1], [pax], [posix], [$1]) -chf - "'"$tardir"' + am__untar="$_am_tar -xf -" + ;; + plaintar) + # Must skip GNU tar: if it does not support --format= it doesn't create + # ustar tarball either. + (tar --version) >/dev/null 2>&1 && continue + am__tar='tar chf - "$$tardir"' + am__tar_='tar chf - "$tardir"' + am__untar='tar xf -' + ;; + pax) + am__tar='pax -L -x $1 -w "$$tardir"' + am__tar_='pax -L -x $1 -w "$tardir"' + am__untar='pax -r' + ;; + cpio) + am__tar='find "$$tardir" -print | cpio -o -H $1 -L' + am__tar_='find "$tardir" -print | cpio -o -H $1 -L' + am__untar='cpio -i -H $1 -d' + ;; + none) + am__tar=false + am__tar_=false + am__untar=false + ;; + esac + + # If the value was cached, stop now. We just wanted to have am__tar + # and am__untar set. + test -n "${am_cv_prog_tar_$1}" && break + + # tar/untar a dummy directory, and stop if the command works. + rm -rf conftest.dir + mkdir conftest.dir + echo GrepMe > conftest.dir/file + AM_RUN_LOG([tardir=conftest.dir && eval $am__tar_ >conftest.tar]) + rm -rf conftest.dir + if test -s conftest.tar; then + AM_RUN_LOG([$am__untar /dev/null 2>&1 && break + fi + done + rm -rf conftest.dir + + AC_CACHE_VAL([am_cv_prog_tar_$1], [am_cv_prog_tar_$1=$_am_tool]) + AC_MSG_RESULT([$am_cv_prog_tar_$1])]) + +AC_SUBST([am__tar]) +AC_SUBST([am__untar]) +]) # _AM_PROG_TAR + diff --git a/cleanup b/cleanup index 3113fc0..a350a38 100755 --- a/cleanup +++ b/cleanup @@ -1,3 +1,4 @@ #!/usr/bin/bash -rm -f src/*.o src/*.so */*~ *~ -rm -f config.* src/Makevars src/config.h +rm -f src/*.o src/*.so */*~ *~ +rm -f src/pmpmeas/*.o src/pmpmeas/lib/*.o +rm -f config.* src/Makevars src/config.h src/stamp-h1 diff --git a/configure b/configure index 7d622f5..ed2f9d3 100755 --- a/configure +++ b/configure @@ -623,6 +623,8 @@ ac_subst_vars='am__EXEEXT_FALSE am__EXEEXT_TRUE LTLIBOBJS LIBOBJS +PMPMEAS_CPP_SOURCE +PMPMEAS_C_SOURCE PAPICNTMAX EGREP GREP @@ -3993,7 +3995,7 @@ else fi -## PMPMEAS +## PMPMEAS DEPENDENCIES # Check whether --enable-metrics was given. if test "${enable_metrics+set}" = set; then : enableval=$enable_metrics; @@ -4116,6 +4118,14 @@ $as_echo "#define RTRACE_SUPPORT /**/" >>confdefs.h fi +## PMPMEAS OBJECTS + +# Dynamically generate list of sources from subdirectories via shell +PMPMEAS_C_SOURCE="$(cd src && ls pmpmeas/src/lib/*.c | tr '\n' ' ')" +PMPMEAS_CPP_SOURCE="$(cd src && ls pmpmeas/src/lib/*.cc | tr '\n' ' ')" + + + ################### # Tells automake to create header file with AC_DEFINE statements diff --git a/configure.ac b/configure.ac index bbb368c..70f4839 100644 --- a/configure.ac +++ b/configure.ac @@ -1,6 +1,3 @@ -# @TODO Set OBJECTS based on pmpmeas dependency -# @TODO Create .PHONY target in Makefile `all: $(SHLIB)` - # Must init the autoconf setup # 1st param is project name, 2nd is version no., 3rd is bug report address AC_INIT([rTrace], [0.0.3]) @@ -11,7 +8,7 @@ AC_CONFIG_SRCDIR([DESCRIPTION]) # Store the auxiliary build tools (e.g., install-sh, config.sub, config.guess) # in this dir (build-aux) AC_CONFIG_AUX_DIR([tools/build-aux]) -AC_CONFIG_MACRO_DIR([../tools]) +AC_CONFIG_MACRO_DIR([tools]) # Init automake, and specify this program use relaxed structures. # i.e. this program doesn't follow the gnu coding standards, and doesn't have @@ -57,7 +54,7 @@ AC_CHECK_HEADERS([otf2/otf2.h], [], AC_SEARCH_LIBS(OTF2_Archive_Open, otf2, [], [AC_MSG_ERROR([Unable to find otf2 libs])]) -## PMPMEAS +## PMPMEAS DEPENDENCIES AC_ARG_ENABLE(metrics, [AS_HELP_STRING([--disable-metrics], [do not use metrics (default: yes)])]) if test "$enable_metrics" != no @@ -85,6 +82,14 @@ then AC_DEFINE(RTRACE_SUPPORT, [], [Tell pmpmeas to compile in R compatible way]) fi +## PMPMEAS OBJECTS + +# Dynamically generate list of sources from subdirectories via shell +PMPMEAS_C_SOURCE="$(cd src && ls pmpmeas/src/lib/*.c | tr '\n' ' ')" +PMPMEAS_CPP_SOURCE="$(cd src && ls pmpmeas/src/lib/*.cc | tr '\n' ' ')" +AC_SUBST(PMPMEAS_C_SOURCE) +AC_SUBST(PMPMEAS_CPP_SOURCE) + ################### # Tells automake to create header file with AC_DEFINE statements diff --git a/src/Makevars.am b/src/Makevars.am index 0deb20e..9a860aa 100644 --- a/src/Makevars.am +++ b/src/Makevars.am @@ -1,12 +1,27 @@ -PAPICNTMAX= @PAPICNTMAX@ -PMPMEAS_PKG_CPPFLAGS= -DPAPICNTMAX=${PAPICNTMAX} +SUBDIRS = pmpmeas +AM_CPPFLAGS = -I. -I$(srcdir)/pmpmeas/src/include/ +AM_LIBS = -L. -L$(srcdir)/pmpmeas/src/lib/ + +PAPICNTMAX = @PAPICNTMAX@ +PMPMEAS_PKG_CPPFLAGS = -DPAPICNTMAX=${PAPICNTMAX} # Flags for headers and libraries when compiling R packages PKG_CPPFLAGS= ${DEFS} ${DEFAULT_INCLUDES} ${INCLUDES} ${AM_CPPFLAGS} \ ${CPPFLAGS} ${AM_CFLAGS} ${CFLAGS} \ ${PMPMEAS_PKG_CPPFLAGS} -PKG_LIBS= @LIBS@ +PKG_LIBS = @LIBS@ ${AM_LIBS} ACLOCAL_AMFLAGS = -I tools +# Includa all .cpp and .c files from `src` and `src/pmpmeas` dirs +BASE_SOURCE = rTrace.cpp RcppExports.cpp +CPP_SOURCE = @PMPMEAS_CPP_SOURCE@ +C_SOURCE = @PMPMEAS_C_SOURCE@ +SOURCES = ${BASE_SOURCE} ${CPP_SOURCE} ${C_SOURCE} +CPP_OBJECTS = $(CPP_SOURCE:.cc=.o) +C_OBJECTS = $(C_SOURCE:.c=.o) +OBJECTS = $(BASE_SOURCE:.cpp=.o) $(CPP_OBJECTS) $(C_OBJECTS) + all: $(SHLIB) + +.PHONY: all clean diff --git a/src/Makevars.in b/src/Makevars.in index fd3f9fc..9aa13b6 100644 --- a/src/Makevars.in +++ b/src/Makevars.in @@ -13,15 +13,6 @@ # PARTICULAR PURPOSE. @SET_MAKE@ - -#AM_CFLAGS = @AM_CFLAGS@ -#AM_CPPFLAGS = @AM_CPPFLAGS@ -#DEFAULT_INCLUDES= @DEFAULT_INCLUDES@ -#DEFS= @DEFS@ -#CFLAGS = @CFLAGS@ -#CPPFLAGS = @CPPFLAGS@ -#INCLUDES = @INCLUDES@ -#LIBS=@LIBS@ VPATH = @srcdir@ am__is_gnu_make = { \ if test -z '$(MAKELEVEL)'; then \ @@ -116,13 +107,28 @@ AM_V_at = $(am__v_at_@AM_V@) am__v_at_ = $(am__v_at_@AM_DEFAULT_V@) am__v_at_0 = @ am__v_at_1 = -SOURCES = DIST_SOURCES = +RECURSIVE_TARGETS = all-recursive check-recursive cscopelist-recursive \ + ctags-recursive dvi-recursive html-recursive info-recursive \ + install-data-recursive install-dvi-recursive \ + install-exec-recursive install-html-recursive \ + install-info-recursive install-pdf-recursive \ + install-ps-recursive install-recursive installcheck-recursive \ + installdirs-recursive pdf-recursive ps-recursive \ + tags-recursive uninstall-recursive am__can_run_installinfo = \ case $$AM_UPDATE_INFO_DIR in \ n|no|NO) false;; \ *) (install-info --version) >/dev/null 2>&1;; \ esac +RECURSIVE_CLEAN_TARGETS = mostlyclean-recursive clean-recursive \ + distclean-recursive maintainer-clean-recursive +am__recursive_targets = \ + $(RECURSIVE_TARGETS) \ + $(RECURSIVE_CLEAN_TARGETS) \ + $(am__extra_recursive_targets) +AM_RECURSIVE_TARGETS = $(am__recursive_targets:-recursive=) TAGS CTAGS \ + distdir distdir-am am__tagged_files = $(HEADERS) $(SOURCES) $(TAGS_FILES) $(LISP) \ config.h.in # Read a list of newline-separated strings from the standard input, @@ -141,8 +147,34 @@ am__define_uniq_tagged_files = \ unique=`for i in $$list; do \ if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \ done | $(am__uniquify_input)` +DIST_SUBDIRS = $(SUBDIRS) am__DIST_COMMON = $(srcdir)/Makevars.in $(srcdir)/config.h.in DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) +am__relativize = \ + dir0=`pwd`; \ + sed_first='s,^\([^/]*\)/.*$$,\1,'; \ + sed_rest='s,^[^/]*/*,,'; \ + sed_last='s,^.*/\([^/]*\)$$,\1,'; \ + sed_butlast='s,/*[^/]*$$,,'; \ + while test -n "$$dir1"; do \ + first=`echo "$$dir1" | sed -e "$$sed_first"`; \ + if test "$$first" != "."; then \ + if test "$$first" = ".."; then \ + dir2=`echo "$$dir0" | sed -e "$$sed_last"`/"$$dir2"; \ + dir0=`echo "$$dir0" | sed -e "$$sed_butlast"`; \ + else \ + first2=`echo "$$dir2" | sed -e "$$sed_first"`; \ + if test "$$first2" = "$$first"; then \ + dir2=`echo "$$dir2" | sed -e "$$sed_rest"`; \ + else \ + dir2="../$$dir2"; \ + fi; \ + dir0="$$dir0"/"$$first"; \ + fi; \ + fi; \ + dir1=`echo "$$dir1" | sed -e "$$sed_rest"`; \ + done; \ + reldir="$$dir2" ACLOCAL = @ACLOCAL@ AMTAR = @AMTAR@ AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@ @@ -188,6 +220,8 @@ PACKAGE_URL = @PACKAGE_URL@ PACKAGE_VERSION = @PACKAGE_VERSION@ PAPICNTMAX = @PAPICNTMAX@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PMPMEAS_CPP_SOURCE = @PMPMEAS_CPP_SOURCE@ +PMPMEAS_C_SOURCE = @PMPMEAS_C_SOURCE@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ STRIP = @STRIP@ @@ -235,19 +269,355 @@ target_alias = @target_alias@ top_build_prefix = @top_build_prefix@ top_builddir = @top_builddir@ top_srcdir = @top_srcdir@ +SUBDIRS = pmpmeas +AM_CPPFLAGS = -I. -I$(srcdir)/pmpmeas/src/include/ +AM_LIBS = -L. -L$(srcdir)/pmpmeas/src/lib/ PMPMEAS_PKG_CPPFLAGS = -DPAPICNTMAX=${PAPICNTMAX} -# 2 main flags for headers and libraries when compiling R packages +# Flags for headers and libraries when compiling R packages PKG_CPPFLAGS = ${DEFS} ${DEFAULT_INCLUDES} ${INCLUDES} ${AM_CPPFLAGS} \ ${CPPFLAGS} ${AM_CFLAGS} ${CFLAGS} \ ${PMPMEAS_PKG_CPPFLAGS} -#PKG_LIBS= ${LIBS} -PKG_LIBS = @LIBS@ +PKG_LIBS = @LIBS@ ${AM_LIBS} ACLOCAL_AMFLAGS = -I tools +# Includa all .cpp and .c files from `src` and `src/pmpmeas` dirs +BASE_SOURCE = rTrace.cpp RcppExports.cpp +CPP_SOURCE = @PMPMEAS_CPP_SOURCE@ +C_SOURCE = @PMPMEAS_C_SOURCE@ +SOURCES = ${BASE_SOURCE} ${CPP_SOURCE} ${C_SOURCE} +CPP_OBJECTS = $(CPP_SOURCE:.cc=.o) +C_OBJECTS = $(C_SOURCE:.c=.o) +OBJECTS = $(BASE_SOURCE:.cpp=.o) $(CPP_OBJECTS) $(C_OBJECTS) +all: config.h + $(MAKE) $(AM_MAKEFLAGS) all-recursive + +.SUFFIXES: +$(srcdir)/Makevars.in: $(srcdir)/Makevars.am $(am__configure_deps) + @for dep in $?; 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