+
+ +
+

Draw Annotations

+

draw annotations like stimulation points, samplings point or synapses.

+ +
+

Draw marks

+
import swc2vtk
+vtkgen = swc2vtk.VtkGenerator()
+vtkgen.add_swc('simple.swc')
+vtkgen.add_mark((1.0, 1.0, 1.0), size=0.5)
+vtkgen.write_vtk('simple.vtk')
+vtkgen.write_annotation_vtk('simple_mark.vtk')
+
+
+_images/simple_annotation1.png +
+
+

Draw SWC compartment marks

+
import swc2vtk
+vtkgen = swc2vtk.VtkGenerator()
+vtkgen.add_swc('simple.swc')
+vtkgen.add_swc_mark(0, 2, size=0.5)
+vtkgen.write_vtk('simple.vtk')
+vtkgen.write_annotation_vtk('simple_swc_mark.vtk')
+
+
+_images/simple_annotation2.png +
+
+

Draw Synapses

+
import swc2vtk
+vtkgen = swc2vtk.VtkGenerator()
+vtkgen.add_swc('simple.swc')
+vtkgen.add_swc('simple.swc', shift_y=30)
+vtkgen.add_swc_connection(0, 2, 1, 1, size=0.5, data=2)
+vtkgen.write_vtk('simple.vtk')
+vtkgen.write_annotation_vtk('simple_connection.vtk')
+
+
+_images/simple_annotation3.png +
+
+ + +
+