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WGBS Bug: coveragePlot.R #33

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vinjana opened this issue Nov 15, 2018 · 1 comment
Open

WGBS Bug: coveragePlot.R #33

vinjana opened this issue Nov 15, 2018 · 1 comment
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@vinjana
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vinjana commented Nov 15, 2018

Bug in R-Script coveragePlot.R, finishes with error:

Error in axis(1, at = pretty(c(0, nrow(sampleOneCon[[i]]))), labels = paste(pretty(c(0,  :
  'at' and 'labels' lengths differ, 8 != 5
Execution halted
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vinjana commented Nov 15, 2018

M. Schlesner: @sjkv mentioned that the plotting script fails with too many open devices. One reason for this might be that it is run on all contigs in the genome, including the unplaced regions, decoy sequences, ...
It is important that the genome coverage plot script runs only on 1-22, X, Y.

@vinjana vinjana added the bug Something isn't working label Mar 11, 2019
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