From 7dfcfbc3d7b13e2eb390674ba3ed55cf2c73acb6 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Paul=20M=C3=BCller?= <dev@craban.de>
Date: Tue, 17 Sep 2024 17:11:44 +0200
Subject: [PATCH] docs: cleanup build process

---
 CHANGELOG                                | 9 +++++----
 dclab/rtdc_dataset/fmt_hierarchy/base.py | 1 -
 docs/conf.py                             | 6 +++---
 docs/sec_changelog.rst                   | 1 +
 docs/sec_code_reference.rst              | 5 -----
 5 files changed, 9 insertions(+), 13 deletions(-)

diff --git a/CHANGELOG b/CHANGELOG
index 2b8e25dd..7b39a6a7 100644
--- a/CHANGELOG
+++ b/CHANGELOG
@@ -1,7 +1,8 @@
 0.61.4
  - docs: update basins section
+ - docs: cleanup build process
 0.61.3
- -  fix: TypeError when of R_HOME is not set
+ - fix: TypeError when of R_HOME is not set
 0.61.2
  - ref: migrate from rpy2 to custom wrapper around R and Rscript binary
  - setup: remove extra [lme4] and rpy2 requirement
@@ -20,7 +21,7 @@
  - enh: improve availability check for HDF5 basin data
  - enh: cache list of features available via all basins
  - enh: speed up feature retrieval for non-ancillary features
- - ref: replace np.string_ with np.bytes_
+ - ref: replace `np.string_` with `np.bytes_`
 0.60.9
  - build: build with macos-latest and macos-13 images
 0.60.8
@@ -252,7 +253,7 @@
  - ref: HDF5Basin gets its own submodule
  - setup: oldest-supported-numpy is not required anymore, since numpy
    is backwards-compatible now
- 0.52.3
+0.52.3
  - maintenance release
 0.52.2
  - maintenance release
@@ -377,7 +378,7 @@
 0.47.3
  - fix: np.histrogram2d does not expect broken normed argument
  - docs: fixed GH Actions badge
- - enh: implement RTDC_HDF5.__len__
+ - enh: implement `RTDC_HDF5.__len__`
 0.47.2
  - enh: add --version flag to CLI
 0.47.1
diff --git a/dclab/rtdc_dataset/fmt_hierarchy/base.py b/dclab/rtdc_dataset/fmt_hierarchy/base.py
index d6166b3f..d0e1a66a 100644
--- a/dclab/rtdc_dataset/fmt_hierarchy/base.py
+++ b/dclab/rtdc_dataset/fmt_hierarchy/base.py
@@ -60,7 +60,6 @@ def __init__(self, hparent, apply_filter=True, *args, **kwargs):
 
         self._events = {}
 
-        #: hierarchy parent
         self.hparent = hparent
 
         self.config = self._create_config()  # init config
diff --git a/docs/conf.py b/docs/conf.py
index f65ce8d7..392e93c6 100644
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -200,11 +200,11 @@
 
 # Example configuration for intersphinx: refer to the Python standard library.
 intersphinx_mapping = {
-    "python": ('https://docs.python.org/', None),
+    "python": ('https://docs.python.org/3/', None),
     "boto3": ('https://boto3.amazonaws.com/v1/documentation/api/latest', None),
     "h5py": ('https://h5py.readthedocs.io/en/stable/', None),
-    "numpy": ('https://docs.scipy.org/doc/numpy/', None),
+    "numpy": ('https://numpy.org/doc/stable/', None),
     "skimage": ('https://scikit-image.org/docs/stable/', None),
-    "scipy": ('https://docs.scipy.org/doc/scipy/reference/', None),
+    "scipy": ('https://docs.scipy.org/doc/scipy/', None),
     "shapeout2": ('https://shapeout2.readthedocs.io/en/stable/', None),
     }
diff --git a/docs/sec_changelog.rst b/docs/sec_changelog.rst
index 5494015d..056d2d9b 100644
--- a/docs/sec_changelog.rst
+++ b/docs/sec_changelog.rst
@@ -6,3 +6,4 @@ Changelog
 List of changes in-between dclab releases.
 
 .. include_changelog:: ../CHANGELOG
+
diff --git a/docs/sec_code_reference.rst b/docs/sec_code_reference.rst
index b49156bf..21d329c7 100644
--- a/docs/sec_code_reference.rst
+++ b/docs/sec_code_reference.rst
@@ -382,11 +382,6 @@ R and lme4
 
 .. _sec_ref_lme4:
 
-.. automodule:: dclab.lme4.rlibs
-   :members:
-   :undoc-members:
-   :exclude-members: MockPackage
-
 .. automodule:: dclab.lme4.rsetup
    :members:
    :undoc-members: