Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

ipyvolume visualization (static timecorr visualization) #74

Open
lucywowen opened this issue Aug 13, 2018 · 2 comments
Open

ipyvolume visualization (static timecorr visualization) #74

lucywowen opened this issue Aug 13, 2018 · 2 comments
Labels
future release
Milestone
future release

Comments

@lucywowen
Copy link
Collaborator

Create a 3D correlation matrix (feature x feature x volume) and change the opacity to increase with stronger (absolute value) correlations.

If the features are voxels, you can arrange them to correspond with functional groups. Then on the side (corresponding to the time axis) display a histogram showing when different stimuli are presented. It would be interesting to see blobby structures emerge at these times.
@jeremymanning
Copy link
Member

Implemented the beginnings of this idea in this notebook

screen shot 2018-08-14 at 10 37 31 pm

@jeremymanning jeremymanning added this to the future release milestone Sep 9, 2019
@lucywowen
Copy link
Collaborator Author

lucywowen commented Feb 13, 2020 •
edited
Loading

  • add a stationary parameter (for variance across time for each cell)
  • need to tag Aaron Lee in this!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
future release
Projects
None yet
Milestone
future release
Development

No branches or pull requests
3 participants
@jeremymanning @lucywowen @amartinez2020