Merge branch 'main' into add-groot-normalizer

BigDataBiology · Aug 7, 2024 · 6633ef1 · 6633ef1
2 parents 2d62163 + d79b890
commit 6633ef1
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diff --git a/examples/hamronized/groot.groot-core-db.tsv b/examples/hamronized/groot.groot-core-db.tsv
@@ -5,3 +5,4 @@ groot.groot-core-db.tsv	groot-db_RESFINDER__tet(O/W)_1_AM889118	groot-db_RESFIND
 groot.groot-core-db.tsv	groot-db_ARGANNOT__(Tet)TetQ:Z21523:362-2287:1926	groot-db_ARGANNOT__(Tet)TetQ:Z21523:362-2287:1926	groot	v	groot-db_ARGANNOT__(Tet)TetQ:Z21523:362-2287:1926	groot	v	gene_presence_detected			539.0																1974								
 groot.groot-core-db.tsv	groot-db_ARGANNOT__(MLS)ErmF:M14730:241-1041:801	groot-db_ARGANNOT__(MLS)ErmF:M14730:241-1041:801	groot	v	groot-db_ARGANNOT__(MLS)ErmF:M14730:241-1041:801	groot	v	gene_presence_detected			321.0																801								
 groot.groot-core-db.tsv	groot-db_RESFINDER__tet(0/32/0)_4_AINH01000038	groot-db_RESFINDER__tet(0/32/0)_4_AINH01000038	groot	v	groot-db_RESFINDER__tet(0/32/0)_4_AINH01000038	groot	v	gene_presence_detected			767.0																1920								
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diff --git a/examples/hamronized/groot.resfinder.tsv b/examples/hamronized/groot.resfinder.tsv
@@ -26,4 +26,4 @@ groot.resfinder.tsv	tet(W)_4_AJ427422	tet(W)_4_AJ427422	groot	v	tet(W)_4_AJ42742
 groot.resfinder.tsv	erm(F)_2_M17124	erm(F)_2_M17124	groot	v	erm(F)_2_M17124	groot	v	gene_presence_detected			321.0																801								
 groot.resfinder.tsv	tet(40)_2_FJ158002	tet(40)_2_FJ158002	groot	v	tet(40)_2_FJ158002	groot	v	gene_presence_detected			409.0																1221								
 groot.resfinder.tsv	erm(F)_3_M17808	erm(F)_3_M17808	groot	v	erm(F)_3_M17808	groot	v	gene_presence_detected			380.0																801								
-groot.resfinder.tsv	tet(Q)_1_L33696	tet(Q)_1_L33696	groot	v	tet(Q)_1_L33696	groot	v	gene_presence_detected			1021.0																1926								
+groot.resfinder.tsv	tet(Q)_1_L33696	tet(Q)_1_L33696	groot	v	tet(Q)_1_L33696	groot	v	gene_presence_detected			1021.0																1926
Original file line number	Diff line number	Diff line change
Expand Up		@@ -5,3 +5,4 @@ groot.groot-core-db.tsv groot-db_RESFINDER__tet(O/W)_1_AM889118 groot-db_RESFIND
		groot.groot-core-db.tsv groot-db_ARGANNOT__(Tet)TetQ:Z21523:362-2287:1926 groot-db_ARGANNOT__(Tet)TetQ:Z21523:362-2287:1926 groot v groot-db_ARGANNOT__(Tet)TetQ:Z21523:362-2287:1926 groot v gene_presence_detected 539.0 1974
		groot.groot-core-db.tsv groot-db_ARGANNOT__(MLS)ErmF:M14730:241-1041:801 groot-db_ARGANNOT__(MLS)ErmF:M14730:241-1041:801 groot v groot-db_ARGANNOT__(MLS)ErmF:M14730:241-1041:801 groot v gene_presence_detected 321.0 801
		groot.groot-core-db.tsv groot-db_RESFINDER__tet(0/32/0)_4_AINH01000038 groot-db_RESFINDER__tet(0/32/0)_4_AINH01000038 groot v groot-db_RESFINDER__tet(0/32/0)_4_AINH01000038 groot v gene_presence_detected 767.0 1920