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Wrapper fails to create excel files #345

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svarona opened this issue Nov 29, 2024 · 0 comments
Open

Wrapper fails to create excel files #345

svarona opened this issue Nov 29, 2024 · 0 comments
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@svarona
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svarona commented Nov 29, 2024

When running wrapper, it fails to create excel files:

Error exporting logs to file: Value must be a list, tuple, range or generator, or a dict. Supplied value is <class 'str'>

This might be because the _metadata_report.jsons are not properly formatted, having an extra line at the end:

image

This might be also causing that, when invalid_samples folder is created in SFTP, the template excel file with the metadata for those samples should be kept in that filder for re-submission

@svarona svarona changed the title Invalid samples should have its excel template Wrapper fails to create excel files Nov 29, 2024
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