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ScoreMatrix returns matrix with wrong dimensions #196

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balwierz opened this issue Jan 27, 2021 · 0 comments
Open

ScoreMatrix returns matrix with wrong dimensions #196

balwierz opened this issue Jan 27, 2021 · 0 comments

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@balwierz
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Example code:

gr1 <- GRanges("a", IRanges(2:10, 3:11))
gr2 <- GRanges("a", IRanges(1, 10))
ScoreMatrix(gr1, gr2)

Expected result: 1x10 ScoreMatrix with data: 0 1 2 2 2 2 2 2 2 2

Observed result: 10x1 ScoreMatrix. The content is correct when transposed.
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@balwierz