diff --git a/CHANGELOG.md b/CHANGELOG.md index 00cc5c32..241030bf 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,9 @@ # Changelog +## 3.3.10 - 2024-08-06 + +- Fixed issue in the UniprotFinder module related to TrEMBL and Swiss-Prot IDs being parsed by BLAST when the `qacc` and `sacc` format specifiers were used with `-outfmt 6`. Switched back to the `qseqid` and `sseqid` format specifiers. + ## 3.3.9 - 2024-07-16 - Fixed an issue related to sequence IDs interpreted by BLAST as PDB chain IDs. diff --git a/CHEWBBACA/__init__.py b/CHEWBBACA/__init__.py index b4bd404e..40bf9483 100644 --- a/CHEWBBACA/__init__.py +++ b/CHEWBBACA/__init__.py @@ -1,2 +1,2 @@ -__version__ = "3.3.9" +__version__ = "3.3.10" diff --git a/CHEWBBACA/docs/conf.py b/CHEWBBACA/docs/conf.py index fdad333e..8483ea33 100644 --- a/CHEWBBACA/docs/conf.py +++ b/CHEWBBACA/docs/conf.py @@ -22,7 +22,7 @@ author = 'Rafael Mamede' # The full version, including alpha/beta/rc tags -release = '3.3.9' +release = '3.3.10' # -- General configuration --------------------------------------------------- diff --git a/CITATION.cff b/CITATION.cff index 4d13289f..73ba3a54 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -13,8 +13,8 @@ authors: given-names: João - family-names: Ramirez given-names: Mário -version: 3.3.9 -date-released: "2023-06-29" +version: 3.3.10 +date-released: "2024-08-06" keywords: - bioinformatics - genomics diff --git a/README.md b/README.md index 106d9fa6..e60c1d05 100644 --- a/README.md +++ b/README.md @@ -17,11 +17,9 @@ BLAST Score Ratio as proposed by [Rasko DA et al.](http://bmcbioinformatics.biom ## News -## 3.3.9 - 2024-07-16 +## 3.3.10 - 2024-08-06 -- Fixed an issue related to sequence IDs interpreted by BLAST as PDB chain IDs. - -- Fixed an issue related to CDS counting when gene prediction returns no CDSs for one or more inputs. +- Fixed issue in the UniprotFinder module related to TrEMBL and Swiss-Prot IDs being parsed by BLAST when the `qacc` and `sacc` format specifiers were used with `-outfmt 6`. Switched back to the `qseqid` and `sseqid` format specifiers. Check our [Changelog](https://github.com/B-UMMI/chewBBACA/blob/master/CHANGELOG.md) to learn about the latest changes. diff --git a/pyproject.toml b/pyproject.toml index 02684436..f7ce735f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta" [project] name = "chewBBACA" -version = "3.3.9" +version = "3.3.10" requires-python = ">=3.8" dependencies = [ "numpy~=1.24.3",