diff --git a/modules/postprocessing/postprocessing.nf b/modules/postprocessing/postprocessing.nf index 3540b51..8c05d3e 100644 --- a/modules/postprocessing/postprocessing.nf +++ b/modules/postprocessing/postprocessing.nf @@ -155,6 +155,7 @@ process SNP_ASSESSMENT { tag { assembler } label 'process_script' + publishDir "results/$sample_id/stats/", pattern: '*.csv' input: tuple val(sample_id), val(assembler), path(assembly), path(mapping)