ci.yml

name: CI

on: pull_request

jobs:
  qa-py:
    name: Python QA
    runs-on: ubuntu-latest

    steps:
      - uses: actions/checkout@v3
      - uses: actions/setup-python@v3
        with:
          python-version: "3.10"
      - uses: snok/install-poetry@v1

      - name: Install dependencies
        run: poetry install

      - name: Run Black to check formatting
        run: poetry run black --check .

      - name: Run isort
        run: |
          poetry run isort --check .
          poetry run nbqa isort --check --float-to-top .

      - name: Run flake8
        run: |
          poetry run flake8 .
          poetry run nbqa flake8 .

      - name: Run nb-clean to check for unnecessary metadata and empty cells in notebooks
        run: poetry run nb-clean check . --preserve-cell-outputs --remove-empty-cells

      - name: Run notebooks to see if they execute without errors
        run: |
          for input_file in $(find src docs/source -type f -name "*.ipynb"); do
            poetry run papermill "$input_file" temp.ipynb
          done